Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC9.67□□□□□ -0.86
Xcl1P47993 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Xcl1P47993 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Xcl1P47993 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Xcl1P47993 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC9.66□□□□□ -0.86
Xcl1P47993 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC9.66□□□□□ -0.86
Xcl1P47993 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Xcl1P47993 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Xcl1P47993 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC9.66□□□□□ -0.86
Xcl1P47993 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Xcl1P47993 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Xcl1P47993 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Xcl1P47993 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Xcl1P47993 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Xcl1P47993 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Xcl1P47993 Gm30238-201ENSMUST00000195528 2603 ntBASIC9.66□□□□□ -0.86
Xcl1P47993 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Xcl1P47993 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Xcl1P47993 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC9.66□□□□□ -0.86
Xcl1P47993 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC9.66□□□□□ -0.86
Xcl1P47993 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC9.66□□□□□ -0.86
Xcl1P47993 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC9.66□□□□□ -0.86
Xcl1P47993 Gm9694-201ENSMUST00000193347 1189 ntBASIC9.66□□□□□ -0.86
Xcl1P47993 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Xcl1P47993 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Xcl1P47993 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Xcl1P47993 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Xcl1P47993 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Xcl1P47993 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Xcl1P47993 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Xcl1P47993 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Xcl1P47993 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Xcl1P47993 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Xcl1P47993 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Xcl1P47993 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC9.66□□□□□ -0.86
Xcl1P47993 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Xcl1P47993 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Xcl1P47993 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Xcl1P47993 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Xcl1P47993 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC9.65□□□□□ -0.86
Xcl1P47993 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Xcl1P47993 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Xcl1P47993 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Xcl1P47993 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Xcl1P47993 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Xcl1P47993 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Xcl1P47993 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Xcl1P47993 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Xcl1P47993 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC9.65□□□□□ -0.86
Xcl1P47993 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Xcl1P47993 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Xcl1P47993 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Xcl1P47993 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Xcl1P47993 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Xcl1P47993 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Xcl1P47993 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC9.65□□□□□ -0.86
Xcl1P47993 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Xcl1P47993 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Xcl1P47993 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC9.65□□□□□ -0.86
Xcl1P47993 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Xcl1P47993 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Xcl1P47993 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Xcl1P47993 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Xcl1P47993 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Xcl1P47993 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Xcl1P47993 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Xcl1P47993 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Xcl1P47993 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC9.65□□□□□ -0.86
Xcl1P47993 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC9.65□□□□□ -0.86
Xcl1P47993 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Xcl1P47993 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Xcl1P47993 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Xcl1P47993 Gm11405-201ENSMUST00000118689 1556 ntBASIC9.65□□□□□ -0.86
Xcl1P47993 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC9.65□□□□□ -0.86
Xcl1P47993 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Xcl1P47993 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Xcl1P47993 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Xcl1P47993 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Xcl1P47993 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Xcl1P47993 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Xcl1P47993 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.86
Xcl1P47993 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Xcl1P47993 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Xcl1P47993 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Xcl1P47993 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC9.65□□□□□ -0.86
Xcl1P47993 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Xcl1P47993 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC9.65□□□□□ -0.87
Xcl1P47993 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Xcl1P47993 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Xcl1P47993 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Xcl1P47993 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Xcl1P47993 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Xcl1P47993 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.87
Xcl1P47993 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Xcl1P47993 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Xcl1P47993 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC9.65□□□□□ -0.87
Xcl1P47993 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Xcl1P47993 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Xcl1P47993 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC9.65□□□□□ -0.87
Xcl1P47993 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC9.65□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms