Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Vps4bP46467 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
Vps4bP46467 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC15.07■□□□□ 0
Vps4bP46467 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC15.07■□□□□ 0
Vps4bP46467 Gm2651-201ENSMUST00000203560 838 ntBASIC15.07■□□□□ 0
Vps4bP46467 CT010506.4-201ENSMUST00000225457 351 ntBASIC15.07■□□□□ 0
Vps4bP46467 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC15.07■□□□□ 0
Vps4bP46467 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Vps4bP46467 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vps4bP46467 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC15.07■□□□□ 0
Vps4bP46467 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vps4bP46467 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Vps4bP46467 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vps4bP46467 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Vps4bP46467 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vps4bP46467 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC15.07■□□□□ 0
Vps4bP46467 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vps4bP46467 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Vps4bP46467 Gm45760-201ENSMUST00000212190 1782 ntBASIC15.06■□□□□ 0
Vps4bP46467 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vps4bP46467 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vps4bP46467 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Vps4bP46467 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC15.06■□□□□ 0
Vps4bP46467 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Vps4bP46467 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Vps4bP46467 Gm7230-201ENSMUST00000173026 815 ntBASIC15.06■□□□□ 0
Vps4bP46467 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC15.06■□□□□ 0
Vps4bP46467 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Vps4bP46467 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
Vps4bP46467 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vps4bP46467 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC15.06■□□□□ 0
Vps4bP46467 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC15.06■□□□□ 0
Vps4bP46467 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vps4bP46467 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vps4bP46467 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vps4bP46467 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.06■□□□□ 0
Vps4bP46467 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Vps4bP46467 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC15.06■□□□□ 0
Vps4bP46467 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.06■□□□□ 0
Vps4bP46467 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vps4bP46467 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Vps4bP46467 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vps4bP46467 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.06■□□□□ 0
Vps4bP46467 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Vps4bP46467 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vps4bP46467 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Vps4bP46467 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vps4bP46467 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Vps4bP46467 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Vps4bP46467 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC15.05■□□□□ 0
Vps4bP46467 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC15.05■□□□□ 0
Vps4bP46467 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ 0
Vps4bP46467 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Vps4bP46467 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Vps4bP46467 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Vps4bP46467 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC15.05■□□□□ 0
Vps4bP46467 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Vps4bP46467 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Vps4bP46467 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Vps4bP46467 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC15.05■□□□□ -0
Vps4bP46467 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC15.05■□□□□ -0
Vps4bP46467 Gm27525-201ENSMUST00000184465 107 ntBASIC15.05■□□□□ -0
Vps4bP46467 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.05■□□□□ -0
Vps4bP46467 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC15.05■□□□□ -0
Vps4bP46467 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Vps4bP46467 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Vps4bP46467 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Vps4bP46467 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Vps4bP46467 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC15.05■□□□□ -0
Vps4bP46467 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Vps4bP46467 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC15.05■□□□□ -0
Vps4bP46467 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Vps4bP46467 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Vps4bP46467 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Vps4bP46467 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.05■□□□□ -0
Vps4bP46467 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC15.05■□□□□ -0
Vps4bP46467 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.05■□□□□ -0
Vps4bP46467 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Vps4bP46467 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC15.05■□□□□ -0
Vps4bP46467 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Vps4bP46467 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Vps4bP46467 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vps4bP46467 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vps4bP46467 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Vps4bP46467 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vps4bP46467 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vps4bP46467 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vps4bP46467 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Vps4bP46467 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Vps4bP46467 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC15.04■□□□□ -0
Vps4bP46467 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vps4bP46467 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vps4bP46467 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Vps4bP46467 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Vps4bP46467 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vps4bP46467 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vps4bP46467 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vps4bP46467 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC15.04■□□□□ -0
Vps4bP46467 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC15.04■□□□□ -0
Vps4bP46467 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms