Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfsf4P43488 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfsf4P43488 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Tnfsf4P43488 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfsf4P43488 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfsf4P43488 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Tnfsf4P43488 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.35□□□□□ -0.11
Tnfsf4P43488 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfsf4P43488 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfsf4P43488 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfsf4P43488 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Tnfsf4P43488 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.35□□□□□ -0.11
Tnfsf4P43488 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfsf4P43488 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.35□□□□□ -0.11
Tnfsf4P43488 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfsf4P43488 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfsf4P43488 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.35□□□□□ -0.11
Tnfsf4P43488 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfsf4P43488 Gm37153-201ENSMUST00000193637 231 ntBASIC14.35□□□□□ -0.11
Tnfsf4P43488 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfsf4P43488 Gm9682-201ENSMUST00000197505 556 ntBASIC14.35□□□□□ -0.11
Tnfsf4P43488 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.35□□□□□ -0.11
Tnfsf4P43488 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC14.35□□□□□ -0.11
Tnfsf4P43488 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfsf4P43488 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfsf4P43488 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Tnfsf4P43488 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfsf4P43488 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfsf4P43488 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfsf4P43488 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfsf4P43488 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfsf4P43488 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfsf4P43488 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.35□□□□□ -0.11
Tnfsf4P43488 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Tnfsf4P43488 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfsf4P43488 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfsf4P43488 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Tnfsf4P43488 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.35□□□□□ -0.11
Tnfsf4P43488 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfsf4P43488 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfsf4P43488 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfsf4P43488 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfsf4P43488 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfsf4P43488 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfsf4P43488 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfsf4P43488 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfsf4P43488 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Tnfsf4P43488 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfsf4P43488 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.34□□□□□ -0.11
Tnfsf4P43488 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfsf4P43488 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfsf4P43488 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Tnfsf4P43488 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Tnfsf4P43488 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfsf4P43488 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfsf4P43488 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.34□□□□□ -0.11
Tnfsf4P43488 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.34□□□□□ -0.11
Tnfsf4P43488 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.34□□□□□ -0.11
Tnfsf4P43488 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Tnfsf4P43488 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfsf4P43488 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfsf4P43488 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Tnfsf4P43488 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Tnfsf4P43488 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfsf4P43488 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfsf4P43488 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfsf4P43488 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.34□□□□□ -0.11
Tnfsf4P43488 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.34□□□□□ -0.11
Tnfsf4P43488 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Tnfsf4P43488 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfsf4P43488 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfsf4P43488 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfsf4P43488 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfsf4P43488 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Tnfsf4P43488 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Tnfsf4P43488 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.33□□□□□ -0.11
Tnfsf4P43488 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.33□□□□□ -0.12
Tnfsf4P43488 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfsf4P43488 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfsf4P43488 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfsf4P43488 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfsf4P43488 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfsf4P43488 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfsf4P43488 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfsf4P43488 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfsf4P43488 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfsf4P43488 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfsf4P43488 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfsf4P43488 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC14.33□□□□□ -0.12
Tnfsf4P43488 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfsf4P43488 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Tnfsf4P43488 Gm5682-201ENSMUST00000173402 505 ntBASIC14.33□□□□□ -0.12
Tnfsf4P43488 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.33□□□□□ -0.12
Tnfsf4P43488 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.33□□□□□ -0.12
Tnfsf4P43488 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.33□□□□□ -0.12
Tnfsf4P43488 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfsf4P43488 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfsf4P43488 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfsf4P43488 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Tnfsf4P43488 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms