Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmx3P42581 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmx3P42581 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.45□□□□□ -0.42
Hmx3P42581 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Hmx3P42581 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmx3P42581 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmx3P42581 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Hmx3P42581 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Hmx3P42581 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Hmx3P42581 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmx3P42581 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmx3P42581 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC12.45□□□□□ -0.42
Hmx3P42581 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmx3P42581 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Hmx3P42581 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmx3P42581 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmx3P42581 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmx3P42581 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmx3P42581 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Hmx3P42581 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmx3P42581 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Hmx3P42581 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmx3P42581 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Hmx3P42581 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmx3P42581 Carlr-201ENSMUST00000181515 2574 ntBASIC12.45□□□□□ -0.42
Hmx3P42581 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Hmx3P42581 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Hmx3P42581 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmx3P42581 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmx3P42581 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmx3P42581 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmx3P42581 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Hmx3P42581 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Hmx3P42581 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.45□□□□□ -0.42
Hmx3P42581 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmx3P42581 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmx3P42581 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmx3P42581 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmx3P42581 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmx3P42581 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmx3P42581 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Hmx3P42581 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmx3P42581 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Hmx3P42581 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmx3P42581 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmx3P42581 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hmx3P42581 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hmx3P42581 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC12.44□□□□□ -0.42
Hmx3P42581 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hmx3P42581 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
Hmx3P42581 AC158538.1-201ENSMUST00000225870 294 ntBASIC12.44□□□□□ -0.42
Hmx3P42581 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmx3P42581 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.44□□□□□ -0.42
Hmx3P42581 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC12.44□□□□□ -0.42
Hmx3P42581 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmx3P42581 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmx3P42581 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmx3P42581 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmx3P42581 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Hmx3P42581 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmx3P42581 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmx3P42581 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmx3P42581 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmx3P42581 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmx3P42581 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.43□□□□□ -0.42
Hmx3P42581 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.43□□□□□ -0.42
Hmx3P42581 Gm38327-201ENSMUST00000195852 1755 ntBASIC12.43□□□□□ -0.42
Hmx3P42581 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmx3P42581 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC12.43□□□□□ -0.42
Hmx3P42581 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.43□□□□□ -0.42
Hmx3P42581 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmx3P42581 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmx3P42581 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC12.43□□□□□ -0.42
Hmx3P42581 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmx3P42581 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hmx3P42581 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmx3P42581 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Hmx3P42581 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmx3P42581 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Hmx3P42581 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Hmx3P42581 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hmx3P42581 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmx3P42581 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmx3P42581 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmx3P42581 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmx3P42581 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hmx3P42581 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hmx3P42581 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hmx3P42581 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hmx3P42581 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmx3P42581 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmx3P42581 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hmx3P42581 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hmx3P42581 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Hmx3P42581 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmx3P42581 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmx3P42581 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC12.42□□□□□ -0.42
Hmx3P42581 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmx3P42581 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmx3P42581 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms