Protein–RNA interactions for Protein: P41245

Mmp9, Matrix metalloproteinase-9, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp9P41245 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mmp9P41245 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mmp9P41245 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC12.49□□□□□ -0.41
Mmp9P41245 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mmp9P41245 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mmp9P41245 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Mmp9P41245 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Mmp9P41245 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Mmp9P41245 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC12.49□□□□□ -0.41
Mmp9P41245 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC12.49□□□□□ -0.41
Mmp9P41245 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mmp9P41245 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Mmp9P41245 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mmp9P41245 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Mmp9P41245 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Mmp9P41245 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mmp9P41245 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mmp9P41245 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mmp9P41245 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mmp9P41245 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.49□□□□□ -0.41
Mmp9P41245 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mmp9P41245 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mmp9P41245 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC12.49□□□□□ -0.41
Mmp9P41245 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mmp9P41245 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
Mmp9P41245 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.49□□□□□ -0.41
Mmp9P41245 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Mmp9P41245 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Mmp9P41245 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Mmp9P41245 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Mmp9P41245 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Mmp9P41245 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Mmp9P41245 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Mmp9P41245 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Mmp9P41245 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Mmp9P41245 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Mmp9P41245 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Mmp9P41245 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Mmp9P41245 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Mmp9P41245 Gm24589-201ENSMUST00000116692 94 ntBASIC12.48□□□□□ -0.41
Mmp9P41245 Gm14722-201ENSMUST00000118943 689 ntBASIC12.48□□□□□ -0.41
Mmp9P41245 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
Mmp9P41245 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Mmp9P41245 Mir3081-201ENSMUST00000175305 84 ntBASIC12.48□□□□□ -0.41
Mmp9P41245 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Mmp9P41245 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Mmp9P41245 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC12.48□□□□□ -0.41
Mmp9P41245 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC12.48□□□□□ -0.41
Mmp9P41245 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Mmp9P41245 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
Mmp9P41245 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Mmp9P41245 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Mmp9P41245 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Mmp9P41245 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Mmp9P41245 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Mmp9P41245 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Mmp9P41245 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.48□□□□□ -0.41
Mmp9P41245 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Mmp9P41245 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.48□□□□□ -0.41
Mmp9P41245 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Mmp9P41245 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Mmp9P41245 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Mmp9P41245 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Mmp9P41245 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Mmp9P41245 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
Mmp9P41245 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Mmp9P41245 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Mmp9P41245 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Mmp9P41245 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Mmp9P41245 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Mmp9P41245 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.47□□□□□ -0.41
Mmp9P41245 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Mmp9P41245 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Mmp9P41245 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Mmp9P41245 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Mmp9P41245 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Mmp9P41245 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Mmp9P41245 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Mmp9P41245 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Mmp9P41245 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Mmp9P41245 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Mmp9P41245 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC12.47□□□□□ -0.41
Mmp9P41245 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Mmp9P41245 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Mmp9P41245 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.47□□□□□ -0.41
Mmp9P41245 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Mmp9P41245 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Mmp9P41245 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Mmp9P41245 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Mmp9P41245 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Mmp9P41245 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Mmp9P41245 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Mmp9P41245 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Mmp9P41245 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.47□□□□□ -0.41
Mmp9P41245 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Mmp9P41245 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Mmp9P41245 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Mmp9P41245 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Mmp9P41245 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Mmp9P41245 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms