Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.2□□□□□ -0.46
Timp3P39876 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Timp3P39876 AC119177.1-201ENSMUST00000227647 1332 ntBASIC12.2□□□□□ -0.46
Timp3P39876 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Timp3P39876 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.2□□□□□ -0.46
Timp3P39876 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Timp3P39876 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Timp3P39876 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Timp3P39876 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Timp3P39876 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Timp3P39876 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.2□□□□□ -0.46
Timp3P39876 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
Timp3P39876 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Timp3P39876 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Timp3P39876 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Timp3P39876 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Timp3P39876 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Timp3P39876 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Timp3P39876 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Timp3P39876 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC12.2□□□□□ -0.46
Timp3P39876 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.2□□□□□ -0.46
Timp3P39876 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Timp3P39876 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Timp3P39876 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Timp3P39876 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC12.2□□□□□ -0.46
Timp3P39876 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Timp3P39876 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Timp3P39876 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Timp3P39876 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Timp3P39876 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Timp3P39876 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Timp3P39876 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Timp3P39876 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Timp3P39876 Gm7669-201ENSMUST00000210184 1603 ntBASIC12.19□□□□□ -0.46
Timp3P39876 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Timp3P39876 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Timp3P39876 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Timp3P39876 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Timp3P39876 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Timp3P39876 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Timp3P39876 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Timp3P39876 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Timp3P39876 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.19□□□□□ -0.46
Timp3P39876 Gm8318-201ENSMUST00000182954 872 ntBASIC12.19□□□□□ -0.46
Timp3P39876 Gm27494-201ENSMUST00000184735 189 ntBASIC12.19□□□□□ -0.46
Timp3P39876 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC12.19□□□□□ -0.46
Timp3P39876 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Timp3P39876 Gm18246-201ENSMUST00000221023 728 ntBASIC12.19□□□□□ -0.46
Timp3P39876 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Timp3P39876 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Timp3P39876 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Timp3P39876 Prkcz2-201ENSMUST00000206136 1756 ntBASIC12.19□□□□□ -0.46
Timp3P39876 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Timp3P39876 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Timp3P39876 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Timp3P39876 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Timp3P39876 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Timp3P39876 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Timp3P39876 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Timp3P39876 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Timp3P39876 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.19□□□□□ -0.46
Timp3P39876 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Timp3P39876 Gm29361-201ENSMUST00000183323 2000 ntBASIC12.18□□□□□ -0.46
Timp3P39876 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Timp3P39876 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Timp3P39876 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Timp3P39876 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Timp3P39876 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Timp3P39876 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Timp3P39876 Gm15427-201ENSMUST00000117288 531 ntBASIC12.18□□□□□ -0.46
Timp3P39876 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC12.18□□□□□ -0.46
Timp3P39876 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC12.18□□□□□ -0.46
Timp3P39876 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Timp3P39876 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Timp3P39876 Gm5177-201ENSMUST00000183092 997 ntBASIC12.18□□□□□ -0.46
Timp3P39876 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC12.18□□□□□ -0.46
Timp3P39876 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC12.18□□□□□ -0.46
Timp3P39876 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Timp3P39876 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Timp3P39876 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Timp3P39876 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC12.18□□□□□ -0.46
Timp3P39876 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Timp3P39876 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Timp3P39876 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.18□□□□□ -0.46
Timp3P39876 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Timp3P39876 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Timp3P39876 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Timp3P39876 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.18□□□□□ -0.46
Timp3P39876 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Timp3P39876 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.18□□□□□ -0.46
Timp3P39876 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Timp3P39876 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Timp3P39876 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC12.18□□□□□ -0.46
Timp3P39876 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Timp3P39876 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Timp3P39876 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Timp3P39876 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Timp3P39876 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Timp3P39876 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Timp3P39876 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms