Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Sftpa1P35242 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sftpa1P35242 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sftpa1P35242 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sftpa1P35242 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sftpa1P35242 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sftpa1P35242 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Sftpa1P35242 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sftpa1P35242 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC13.67□□□□□ -0.22
Sftpa1P35242 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sftpa1P35242 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Sftpa1P35242 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sftpa1P35242 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sftpa1P35242 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sftpa1P35242 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sftpa1P35242 Gm22189-201ENSMUST00000103822 86 ntBASIC13.67□□□□□ -0.22
Sftpa1P35242 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sftpa1P35242 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.67□□□□□ -0.22
Sftpa1P35242 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.67□□□□□ -0.22
Sftpa1P35242 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sftpa1P35242 Gm5479-201ENSMUST00000160578 435 ntBASIC13.67□□□□□ -0.22
Sftpa1P35242 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sftpa1P35242 Gm9522-201ENSMUST00000182394 926 ntBASIC13.67□□□□□ -0.22
Sftpa1P35242 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sftpa1P35242 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC13.67□□□□□ -0.22
Sftpa1P35242 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.67□□□□□ -0.22
Sftpa1P35242 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.67□□□□□ -0.22
Sftpa1P35242 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sftpa1P35242 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Sftpa1P35242 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sftpa1P35242 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sftpa1P35242 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sftpa1P35242 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sftpa1P35242 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sftpa1P35242 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sftpa1P35242 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sftpa1P35242 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sftpa1P35242 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sftpa1P35242 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Sftpa1P35242 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Sftpa1P35242 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sftpa1P35242 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sftpa1P35242 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sftpa1P35242 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sftpa1P35242 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sftpa1P35242 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sftpa1P35242 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13.66□□□□□ -0.22
Sftpa1P35242 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.66□□□□□ -0.22
Sftpa1P35242 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sftpa1P35242 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sftpa1P35242 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sftpa1P35242 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sftpa1P35242 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sftpa1P35242 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sftpa1P35242 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Sftpa1P35242 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sftpa1P35242 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.65□□□□□ -0.22
Sftpa1P35242 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sftpa1P35242 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sftpa1P35242 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Sftpa1P35242 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Sftpa1P35242 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC13.65□□□□□ -0.22
Sftpa1P35242 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sftpa1P35242 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sftpa1P35242 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sftpa1P35242 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC13.65□□□□□ -0.22
Sftpa1P35242 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Sftpa1P35242 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sftpa1P35242 Gm37166-201ENSMUST00000195473 2474 ntBASIC13.65□□□□□ -0.22
Sftpa1P35242 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sftpa1P35242 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sftpa1P35242 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.65□□□□□ -0.22
Sftpa1P35242 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sftpa1P35242 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Sftpa1P35242 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sftpa1P35242 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sftpa1P35242 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Sftpa1P35242 Gm44719-201ENSMUST00000206404 149 ntBASIC13.65□□□□□ -0.22
Sftpa1P35242 Gm16476-201ENSMUST00000221544 139 ntBASIC13.65□□□□□ -0.22
Sftpa1P35242 Dupd1-202ENSMUST00000224735 548 ntBASIC13.65□□□□□ -0.22
Sftpa1P35242 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Sftpa1P35242 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Sftpa1P35242 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sftpa1P35242 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sftpa1P35242 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sftpa1P35242 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sftpa1P35242 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sftpa1P35242 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sftpa1P35242 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sftpa1P35242 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sftpa1P35242 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Sftpa1P35242 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Sftpa1P35242 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sftpa1P35242 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sftpa1P35242 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sftpa1P35242 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sftpa1P35242 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sftpa1P35242 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Sftpa1P35242 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sftpa1P35242 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms