Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc6a1P31648 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.81□□□□□ -0.36
Slc6a1P31648 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc6a1P31648 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc6a1P31648 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc6a1P31648 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Slc6a1P31648 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc6a1P31648 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc6a1P31648 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc6a1P31648 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc6a1P31648 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc6a1P31648 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Slc6a1P31648 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Slc6a1P31648 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC12.8□□□□□ -0.36
Slc6a1P31648 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc6a1P31648 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Slc6a1P31648 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc6a1P31648 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc6a1P31648 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc6a1P31648 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.8□□□□□ -0.36
Slc6a1P31648 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc6a1P31648 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc6a1P31648 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Slc6a1P31648 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC12.8□□□□□ -0.36
Slc6a1P31648 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Slc6a1P31648 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC12.8□□□□□ -0.36
Slc6a1P31648 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Slc6a1P31648 Mir3081-201ENSMUST00000175305 84 ntBASIC12.8□□□□□ -0.36
Slc6a1P31648 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC12.8□□□□□ -0.36
Slc6a1P31648 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC12.8□□□□□ -0.36
Slc6a1P31648 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC12.8□□□□□ -0.36
Slc6a1P31648 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc6a1P31648 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc6a1P31648 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc6a1P31648 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc6a1P31648 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Slc6a1P31648 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc6a1P31648 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc6a1P31648 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Slc6a1P31648 Gm9889-202ENSMUST00000206983 1577 ntBASIC12.8□□□□□ -0.36
Slc6a1P31648 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Slc6a1P31648 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc6a1P31648 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc6a1P31648 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Slc6a1P31648 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Slc6a1P31648 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc6a1P31648 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc6a1P31648 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc6a1P31648 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc6a1P31648 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc6a1P31648 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Slc6a1P31648 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Slc6a1P31648 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc6a1P31648 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Slc6a1P31648 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Slc6a1P31648 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Slc6a1P31648 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Slc6a1P31648 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Slc6a1P31648 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Slc6a1P31648 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Slc6a1P31648 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.79□□□□□ -0.36
Slc6a1P31648 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Slc6a1P31648 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.79□□□□□ -0.36
Slc6a1P31648 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Slc6a1P31648 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Slc6a1P31648 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Slc6a1P31648 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Slc6a1P31648 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC12.79□□□□□ -0.36
Slc6a1P31648 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Slc6a1P31648 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Slc6a1P31648 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC12.79□□□□□ -0.36
Slc6a1P31648 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC12.79□□□□□ -0.36
Slc6a1P31648 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Slc6a1P31648 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Slc6a1P31648 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Slc6a1P31648 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Slc6a1P31648 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Slc6a1P31648 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Slc6a1P31648 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Slc6a1P31648 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Slc6a1P31648 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Slc6a1P31648 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Slc6a1P31648 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Slc6a1P31648 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Slc6a1P31648 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Slc6a1P31648 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Slc6a1P31648 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
Slc6a1P31648 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Slc6a1P31648 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Slc6a1P31648 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Slc6a1P31648 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Slc6a1P31648 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Slc6a1P31648 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC12.78□□□□□ -0.36
Slc6a1P31648 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Slc6a1P31648 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Slc6a1P31648 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.78□□□□□ -0.36
Slc6a1P31648 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Slc6a1P31648 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Slc6a1P31648 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Slc6a1P31648 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms