Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Hoxc11P31313 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.4□□□□□ -0.1
Hoxc11P31313 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxc11P31313 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxc11P31313 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxc11P31313 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxc11P31313 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxc11P31313 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Hoxc11P31313 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxc11P31313 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxc11P31313 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Hoxc11P31313 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxc11P31313 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxc11P31313 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Hoxc11P31313 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxc11P31313 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxc11P31313 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc11P31313 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc11P31313 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc11P31313 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc11P31313 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc11P31313 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc11P31313 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc11P31313 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.39□□□□□ -0.11
Hoxc11P31313 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc11P31313 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc11P31313 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc11P31313 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc11P31313 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc11P31313 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc11P31313 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc11P31313 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Hoxc11P31313 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc11P31313 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc11P31313 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc11P31313 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc11P31313 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.39□□□□□ -0.11
Hoxc11P31313 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.39□□□□□ -0.11
Hoxc11P31313 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Hoxc11P31313 Gm18889-201ENSMUST00000174284 929 ntBASIC14.39□□□□□ -0.11
Hoxc11P31313 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc11P31313 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc11P31313 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.39□□□□□ -0.11
Hoxc11P31313 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc11P31313 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc11P31313 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc11P31313 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Hoxc11P31313 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc11P31313 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.39□□□□□ -0.11
Hoxc11P31313 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc11P31313 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc11P31313 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc11P31313 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc11P31313 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc11P31313 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxc11P31313 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.39□□□□□ -0.11
Hoxc11P31313 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc11P31313 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc11P31313 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc11P31313 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc11P31313 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc11P31313 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc11P31313 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc11P31313 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Hoxc11P31313 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc11P31313 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.38□□□□□ -0.11
Hoxc11P31313 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc11P31313 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc11P31313 Gm9385-201ENSMUST00000117563 472 ntBASIC14.38□□□□□ -0.11
Hoxc11P31313 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.38□□□□□ -0.11
Hoxc11P31313 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc11P31313 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc11P31313 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc11P31313 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.38□□□□□ -0.11
Hoxc11P31313 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.38□□□□□ -0.11
Hoxc11P31313 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Hoxc11P31313 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Hoxc11P31313 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc11P31313 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.38□□□□□ -0.11
Hoxc11P31313 Gm10154-201ENSMUST00000084445 354 ntBASIC14.38□□□□□ -0.11
Hoxc11P31313 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Hoxc11P31313 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc11P31313 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc11P31313 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc11P31313 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc11P31313 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc11P31313 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc11P31313 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc11P31313 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc11P31313 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc11P31313 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc11P31313 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc11P31313 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hoxc11P31313 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc11P31313 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc11P31313 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc11P31313 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.37□□□□□ -0.11
Hoxc11P31313 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Hoxc11P31313 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc11P31313 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms