Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nedd8P29595 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nedd8P29595 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nedd8P29595 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC13.75□□□□□ -0.21
Nedd8P29595 Gm29994-201ENSMUST00000195495 1193 ntBASIC13.75□□□□□ -0.21
Nedd8P29595 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nedd8P29595 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nedd8P29595 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nedd8P29595 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nedd8P29595 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nedd8P29595 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.75□□□□□ -0.21
Nedd8P29595 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nedd8P29595 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nedd8P29595 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nedd8P29595 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nedd8P29595 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Nedd8P29595 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nedd8P29595 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nedd8P29595 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nedd8P29595 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nedd8P29595 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.74□□□□□ -0.21
Nedd8P29595 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nedd8P29595 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nedd8P29595 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nedd8P29595 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Nedd8P29595 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nedd8P29595 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nedd8P29595 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
Nedd8P29595 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC13.74□□□□□ -0.21
Nedd8P29595 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC13.74□□□□□ -0.21
Nedd8P29595 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nedd8P29595 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC13.74□□□□□ -0.21
Nedd8P29595 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nedd8P29595 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nedd8P29595 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nedd8P29595 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nedd8P29595 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nedd8P29595 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.74□□□□□ -0.21
Nedd8P29595 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Nedd8P29595 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nedd8P29595 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nedd8P29595 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nedd8P29595 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nedd8P29595 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nedd8P29595 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nedd8P29595 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nedd8P29595 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nedd8P29595 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nedd8P29595 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC13.74□□□□□ -0.21
Nedd8P29595 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nedd8P29595 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nedd8P29595 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nedd8P29595 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nedd8P29595 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nedd8P29595 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nedd8P29595 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nedd8P29595 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.74□□□□□ -0.21
Nedd8P29595 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nedd8P29595 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC13.74□□□□□ -0.21
Nedd8P29595 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nedd8P29595 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nedd8P29595 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Nedd8P29595 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Nedd8P29595 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nedd8P29595 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nedd8P29595 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nedd8P29595 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nedd8P29595 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nedd8P29595 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Nedd8P29595 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC13.73□□□□□ -0.21
Nedd8P29595 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nedd8P29595 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Nedd8P29595 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Nedd8P29595 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nedd8P29595 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Nedd8P29595 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nedd8P29595 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nedd8P29595 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Nedd8P29595 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nedd8P29595 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.73□□□□□ -0.21
Nedd8P29595 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Nedd8P29595 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Nedd8P29595 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nedd8P29595 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.73□□□□□ -0.21
Nedd8P29595 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nedd8P29595 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nedd8P29595 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nedd8P29595 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Nedd8P29595 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nedd8P29595 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.72□□□□□ -0.21
Nedd8P29595 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Nedd8P29595 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nedd8P29595 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nedd8P29595 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nedd8P29595 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nedd8P29595 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nedd8P29595 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nedd8P29595 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.72□□□□□ -0.21
Nedd8P29595 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nedd8P29595 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms