Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col2a1P28481 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Col2a1P28481 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col2a1P28481 Gm6473-201ENSMUST00000188572 1210 ntBASIC16.67■□□□□ 0.26
Col2a1P28481 Gm44608-201ENSMUST00000206827 855 ntBASIC16.67■□□□□ 0.26
Col2a1P28481 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col2a1P28481 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col2a1P28481 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Col2a1P28481 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col2a1P28481 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.67■□□□□ 0.26
Col2a1P28481 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col2a1P28481 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col2a1P28481 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col2a1P28481 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Col2a1P28481 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col2a1P28481 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col2a1P28481 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Col2a1P28481 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Col2a1P28481 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col2a1P28481 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col2a1P28481 Gm12585-201ENSMUST00000117307 290 ntBASIC16.67■□□□□ 0.26
Col2a1P28481 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col2a1P28481 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC16.67■□□□□ 0.26
Col2a1P28481 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC16.67■□□□□ 0.26
Col2a1P28481 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Col2a1P28481 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Col2a1P28481 Gm6218-201ENSMUST00000219812 628 ntBASIC16.67■□□□□ 0.26
Col2a1P28481 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC16.67■□□□□ 0.26
Col2a1P28481 AC154806.6-201ENSMUST00000228192 202 ntBASIC16.67■□□□□ 0.26
Col2a1P28481 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC16.67■□□□□ 0.26
Col2a1P28481 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col2a1P28481 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col2a1P28481 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Col2a1P28481 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Col2a1P28481 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col2a1P28481 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col2a1P28481 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Col2a1P28481 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Col2a1P28481 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col2a1P28481 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.66■□□□□ 0.26
Col2a1P28481 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col2a1P28481 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Col2a1P28481 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC16.66■□□□□ 0.26
Col2a1P28481 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Col2a1P28481 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col2a1P28481 Gm12859-201ENSMUST00000117834 427 ntBASIC16.66■□□□□ 0.26
Col2a1P28481 Gm15460-201ENSMUST00000118147 391 ntBASIC16.66■□□□□ 0.26
Col2a1P28481 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC16.66■□□□□ 0.26
Col2a1P28481 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Col2a1P28481 AL593843.1-201ENSMUST00000195891 145 ntBASIC16.66■□□□□ 0.26
Col2a1P28481 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC16.66■□□□□ 0.26
Col2a1P28481 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col2a1P28481 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col2a1P28481 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Col2a1P28481 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Col2a1P28481 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC16.66■□□□□ 0.26
Col2a1P28481 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col2a1P28481 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Col2a1P28481 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Col2a1P28481 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col2a1P28481 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col2a1P28481 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col2a1P28481 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col2a1P28481 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Col2a1P28481 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.65■□□□□ 0.26
Col2a1P28481 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.65■□□□□ 0.26
Col2a1P28481 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Col2a1P28481 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col2a1P28481 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col2a1P28481 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col2a1P28481 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col2a1P28481 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Col2a1P28481 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC16.65■□□□□ 0.26
Col2a1P28481 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Col2a1P28481 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col2a1P28481 AC153872.1-201ENSMUST00000199539 128 ntBASIC16.65■□□□□ 0.26
Col2a1P28481 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC16.65■□□□□ 0.26
Col2a1P28481 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC16.65■□□□□ 0.26
Col2a1P28481 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col2a1P28481 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col2a1P28481 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col2a1P28481 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col2a1P28481 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col2a1P28481 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.65■□□□□ 0.26
Col2a1P28481 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col2a1P28481 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Col2a1P28481 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Col2a1P28481 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col2a1P28481 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col2a1P28481 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.64■□□□□ 0.25
Col2a1P28481 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col2a1P28481 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col2a1P28481 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col2a1P28481 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Col2a1P28481 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Col2a1P28481 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col2a1P28481 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Col2a1P28481 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Col2a1P28481 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col2a1P28481 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms