Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Pde6aP27664 Gm43598-201ENSMUST00000202482 2479 ntBASIC17.21■□□□□ 0.35
Pde6aP27664 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Pde6aP27664 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC17.21■□□□□ 0.35
Pde6aP27664 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC17.21■□□□□ 0.35
Pde6aP27664 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Pde6aP27664 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC17.21■□□□□ 0.35
Pde6aP27664 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Pde6aP27664 Gm4691-201ENSMUST00000182339 1000 ntBASIC17.21■□□□□ 0.35
Pde6aP27664 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pde6aP27664 Gm2213-201ENSMUST00000197485 688 ntBASIC17.21■□□□□ 0.35
Pde6aP27664 Gm2451-201ENSMUST00000199447 999 ntBASIC17.21■□□□□ 0.35
Pde6aP27664 Gm10290-201ENSMUST00000200451 999 ntBASIC17.21■□□□□ 0.35
Pde6aP27664 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
Pde6aP27664 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pde6aP27664 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pde6aP27664 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pde6aP27664 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pde6aP27664 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pde6aP27664 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pde6aP27664 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Pde6aP27664 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pde6aP27664 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pde6aP27664 AC126250.1-201ENSMUST00000228343 1768 ntBASIC17.2■□□□□ 0.34
Pde6aP27664 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC17.2■□□□□ 0.34
Pde6aP27664 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pde6aP27664 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Pde6aP27664 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pde6aP27664 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC17.2■□□□□ 0.34
Pde6aP27664 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pde6aP27664 Gm13332-201ENSMUST00000120451 1398 ntBASIC17.2■□□□□ 0.34
Pde6aP27664 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pde6aP27664 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC17.2■□□□□ 0.34
Pde6aP27664 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pde6aP27664 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pde6aP27664 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC17.2■□□□□ 0.34
Pde6aP27664 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Pde6aP27664 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Pde6aP27664 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Pde6aP27664 Gm27494-201ENSMUST00000184735 189 ntBASIC17.2■□□□□ 0.34
Pde6aP27664 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC17.2■□□□□ 0.34
Pde6aP27664 Gm43073-201ENSMUST00000198200 1189 ntBASIC17.2■□□□□ 0.34
Pde6aP27664 Klk2-ps-201ENSMUST00000205342 571 ntBASIC17.2■□□□□ 0.34
Pde6aP27664 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC17.2■□□□□ 0.34
Pde6aP27664 Gm5628-201ENSMUST00000222318 1049 ntBASIC17.2■□□□□ 0.34
Pde6aP27664 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Pde6aP27664 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pde6aP27664 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pde6aP27664 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pde6aP27664 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Pde6aP27664 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pde6aP27664 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pde6aP27664 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pde6aP27664 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Pde6aP27664 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC17.2■□□□□ 0.34
Pde6aP27664 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pde6aP27664 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pde6aP27664 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pde6aP27664 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pde6aP27664 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pde6aP27664 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pde6aP27664 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pde6aP27664 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Pde6aP27664 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pde6aP27664 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pde6aP27664 Gm37305-201ENSMUST00000195714 4279 ntBASIC17.19■□□□□ 0.34
Pde6aP27664 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pde6aP27664 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pde6aP27664 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pde6aP27664 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC17.19■□□□□ 0.34
Pde6aP27664 Gm27702-201ENSMUST00000184512 56 ntBASIC17.19■□□□□ 0.34
Pde6aP27664 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC17.19■□□□□ 0.34
Pde6aP27664 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC17.19■□□□□ 0.34
Pde6aP27664 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC17.19■□□□□ 0.34
Pde6aP27664 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pde6aP27664 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pde6aP27664 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pde6aP27664 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pde6aP27664 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pde6aP27664 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC17.18■□□□□ 0.34
Pde6aP27664 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC17.18■□□□□ 0.34
Pde6aP27664 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pde6aP27664 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pde6aP27664 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pde6aP27664 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pde6aP27664 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Pde6aP27664 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Pde6aP27664 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pde6aP27664 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pde6aP27664 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pde6aP27664 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pde6aP27664 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pde6aP27664 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pde6aP27664 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC17.18■□□□□ 0.34
Pde6aP27664 Gm13365-201ENSMUST00000121188 973 ntBASIC17.18■□□□□ 0.34
Pde6aP27664 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC17.18■□□□□ 0.34
Pde6aP27664 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Pde6aP27664 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Pde6aP27664 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pde6aP27664 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms