Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cd40P27512 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Cd40P27512 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cd40P27512 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cd40P27512 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cd40P27512 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cd40P27512 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cd40P27512 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cd40P27512 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cd40P27512 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cd40P27512 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cd40P27512 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cd40P27512 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cd40P27512 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cd40P27512 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cd40P27512 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cd40P27512 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cd40P27512 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cd40P27512 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cd40P27512 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cd40P27512 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cd40P27512 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cd40P27512 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cd40P27512 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cd40P27512 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cd40P27512 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Cd40P27512 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC13.42□□□□□ -0.26
Cd40P27512 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cd40P27512 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.42□□□□□ -0.26
Cd40P27512 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cd40P27512 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.42□□□□□ -0.26
Cd40P27512 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.42□□□□□ -0.26
Cd40P27512 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cd40P27512 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cd40P27512 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cd40P27512 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cd40P27512 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cd40P27512 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Cd40P27512 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cd40P27512 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cd40P27512 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Cd40P27512 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cd40P27512 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cd40P27512 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Cd40P27512 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cd40P27512 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.42□□□□□ -0.26
Cd40P27512 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cd40P27512 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cd40P27512 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Cd40P27512 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cd40P27512 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cd40P27512 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.42□□□□□ -0.26
Cd40P27512 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cd40P27512 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cd40P27512 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cd40P27512 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Cd40P27512 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cd40P27512 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cd40P27512 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cd40P27512 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cd40P27512 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cd40P27512 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Cd40P27512 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cd40P27512 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cd40P27512 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC13.41□□□□□ -0.26
Cd40P27512 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cd40P27512 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cd40P27512 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cd40P27512 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC13.41□□□□□ -0.26
Cd40P27512 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cd40P27512 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC13.41□□□□□ -0.26
Cd40P27512 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cd40P27512 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cd40P27512 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.41□□□□□ -0.26
Cd40P27512 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.41□□□□□ -0.26
Cd40P27512 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cd40P27512 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cd40P27512 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cd40P27512 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cd40P27512 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cd40P27512 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Cd40P27512 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cd40P27512 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cd40P27512 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cd40P27512 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cd40P27512 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cd40P27512 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cd40P27512 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.4□□□□□ -0.26
Cd40P27512 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cd40P27512 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cd40P27512 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cd40P27512 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cd40P27512 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Cd40P27512 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cd40P27512 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cd40P27512 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cd40P27512 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cd40P27512 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cd40P27512 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.4□□□□□ -0.26
Cd40P27512 Gm9726-201ENSMUST00000180321 678 ntBASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms