Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgn1P18608 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgn1P18608 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Hmgn1P18608 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
Hmgn1P18608 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC13.6□□□□□ -0.23
Hmgn1P18608 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgn1P18608 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgn1P18608 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.6□□□□□ -0.23
Hmgn1P18608 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Hmgn1P18608 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Hmgn1P18608 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC13.6□□□□□ -0.23
Hmgn1P18608 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgn1P18608 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Hmgn1P18608 AC153889.1-201ENSMUST00000219257 330 ntBASIC13.6□□□□□ -0.23
Hmgn1P18608 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgn1P18608 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgn1P18608 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgn1P18608 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgn1P18608 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgn1P18608 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgn1P18608 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Hmgn1P18608 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgn1P18608 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgn1P18608 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgn1P18608 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgn1P18608 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hmgn1P18608 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.59□□□□□ -0.23
Hmgn1P18608 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgn1P18608 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgn1P18608 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgn1P18608 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgn1P18608 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgn1P18608 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgn1P18608 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgn1P18608 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgn1P18608 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Hmgn1P18608 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Hmgn1P18608 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgn1P18608 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgn1P18608 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC13.59□□□□□ -0.23
Hmgn1P18608 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgn1P18608 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgn1P18608 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Hmgn1P18608 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgn1P18608 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgn1P18608 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgn1P18608 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgn1P18608 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgn1P18608 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgn1P18608 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgn1P18608 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgn1P18608 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgn1P18608 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hmgn1P18608 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Hmgn1P18608 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Hmgn1P18608 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Hmgn1P18608 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Hmgn1P18608 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.58□□□□□ -0.23
Hmgn1P18608 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Hmgn1P18608 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hmgn1P18608 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Hmgn1P18608 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Hmgn1P18608 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Hmgn1P18608 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Hmgn1P18608 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC13.58□□□□□ -0.24
Hmgn1P18608 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Hmgn1P18608 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Hmgn1P18608 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hmgn1P18608 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hmgn1P18608 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
Hmgn1P18608 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.58□□□□□ -0.24
Hmgn1P18608 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hmgn1P18608 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hmgn1P18608 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Hmgn1P18608 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hmgn1P18608 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Hmgn1P18608 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hmgn1P18608 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hmgn1P18608 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hmgn1P18608 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hmgn1P18608 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Hmgn1P18608 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Hmgn1P18608 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hmgn1P18608 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hmgn1P18608 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hmgn1P18608 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hmgn1P18608 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hmgn1P18608 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hmgn1P18608 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hmgn1P18608 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hmgn1P18608 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hmgn1P18608 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hmgn1P18608 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hmgn1P18608 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hmgn1P18608 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hmgn1P18608 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC13.57□□□□□ -0.24
Hmgn1P18608 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.57□□□□□ -0.24
Hmgn1P18608 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hmgn1P18608 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hmgn1P18608 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms