Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Hoxc6P10629 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Hoxc6P10629 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hoxc6P10629 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hoxc6P10629 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Hoxc6P10629 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hoxc6P10629 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Hoxc6P10629 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Hoxc6P10629 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Hoxc6P10629 Gm6912-201ENSMUST00000117218 544 ntBASIC16.41■□□□□ 0.22
Hoxc6P10629 Gm13464-201ENSMUST00000119418 935 ntBASIC16.41■□□□□ 0.22
Hoxc6P10629 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC16.41■□□□□ 0.22
Hoxc6P10629 Gm23984-201ENSMUST00000157139 203 ntBASIC16.41■□□□□ 0.22
Hoxc6P10629 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Hoxc6P10629 Gm18018-201ENSMUST00000198273 408 ntBASIC16.41■□□□□ 0.22
Hoxc6P10629 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC16.41■□□□□ 0.22
Hoxc6P10629 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hoxc6P10629 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Hoxc6P10629 Mxra8os-201ENSMUST00000097740 687 ntBASIC16.41■□□□□ 0.22
Hoxc6P10629 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hoxc6P10629 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.41■□□□□ 0.22
Hoxc6P10629 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC16.41■□□□□ 0.22
Hoxc6P10629 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.41■□□□□ 0.22
Hoxc6P10629 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hoxc6P10629 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hoxc6P10629 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hoxc6P10629 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hoxc6P10629 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Hoxc6P10629 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hoxc6P10629 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Hoxc6P10629 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hoxc6P10629 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hoxc6P10629 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.4■□□□□ 0.22
Hoxc6P10629 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.4■□□□□ 0.22
Hoxc6P10629 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hoxc6P10629 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC16.4■□□□□ 0.22
Hoxc6P10629 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Hoxc6P10629 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hoxc6P10629 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Hoxc6P10629 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hoxc6P10629 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hoxc6P10629 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hoxc6P10629 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Hoxc6P10629 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Hoxc6P10629 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Hoxc6P10629 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hoxc6P10629 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hoxc6P10629 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Hoxc6P10629 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Hoxc6P10629 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC16.4■□□□□ 0.22
Hoxc6P10629 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Hoxc6P10629 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Hoxc6P10629 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC16.4■□□□□ 0.22
Hoxc6P10629 Gm45668-201ENSMUST00000211271 493 ntBASIC16.4■□□□□ 0.22
Hoxc6P10629 Cdk7-205ENSMUST00000225990 1159 ntBASIC16.4■□□□□ 0.22
Hoxc6P10629 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hoxc6P10629 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hoxc6P10629 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hoxc6P10629 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hoxc6P10629 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hoxc6P10629 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hoxc6P10629 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
Hoxc6P10629 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Hoxc6P10629 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hoxc6P10629 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC16.4■□□□□ 0.22
Hoxc6P10629 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Hoxc6P10629 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Hoxc6P10629 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Hoxc6P10629 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Hoxc6P10629 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Hoxc6P10629 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hoxc6P10629 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hoxc6P10629 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Hoxc6P10629 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Hoxc6P10629 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Hoxc6P10629 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC16.39■□□□□ 0.21
Hoxc6P10629 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC16.39■□□□□ 0.21
Hoxc6P10629 Gm45453-201ENSMUST00000211758 853 ntBASIC16.39■□□□□ 0.21
Hoxc6P10629 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC16.39■□□□□ 0.21
Hoxc6P10629 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hoxc6P10629 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Hoxc6P10629 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Hoxc6P10629 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hoxc6P10629 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hoxc6P10629 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC16.39■□□□□ 0.21
Hoxc6P10629 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hoxc6P10629 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hoxc6P10629 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Hoxc6P10629 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hoxc6P10629 Gm15222-202ENSMUST00000228667 1726 ntBASIC16.39■□□□□ 0.21
Hoxc6P10629 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.39■□□□□ 0.21
Hoxc6P10629 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Hoxc6P10629 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hoxc6P10629 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hoxc6P10629 Tcf21-202ENSMUST00000218002 1788 ntBASIC16.38■□□□□ 0.21
Hoxc6P10629 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hoxc6P10629 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hoxc6P10629 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hoxc6P10629 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hoxc6P10629 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms