Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
ApoeP08226 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ApoeP08226 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
ApoeP08226 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
ApoeP08226 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ApoeP08226 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ApoeP08226 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ApoeP08226 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
ApoeP08226 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ApoeP08226 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ApoeP08226 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
ApoeP08226 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.07□□□□□ -0.16
ApoeP08226 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC14.07□□□□□ -0.16
ApoeP08226 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.07□□□□□ -0.16
ApoeP08226 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ApoeP08226 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ApoeP08226 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
ApoeP08226 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
ApoeP08226 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
ApoeP08226 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
ApoeP08226 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.07□□□□□ -0.16
ApoeP08226 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
ApoeP08226 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
ApoeP08226 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.07□□□□□ -0.16
ApoeP08226 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ApoeP08226 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ApoeP08226 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
ApoeP08226 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ApoeP08226 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ApoeP08226 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ApoeP08226 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
ApoeP08226 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ApoeP08226 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ApoeP08226 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
ApoeP08226 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ApoeP08226 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
ApoeP08226 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ApoeP08226 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
ApoeP08226 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ApoeP08226 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ApoeP08226 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ApoeP08226 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ApoeP08226 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ApoeP08226 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ApoeP08226 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.06□□□□□ -0.16
ApoeP08226 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
ApoeP08226 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ApoeP08226 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.06□□□□□ -0.16
ApoeP08226 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ApoeP08226 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
ApoeP08226 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.06□□□□□ -0.16
ApoeP08226 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ApoeP08226 Gm8655-201ENSMUST00000221159 852 ntBASIC14.06□□□□□ -0.16
ApoeP08226 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
ApoeP08226 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ApoeP08226 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
ApoeP08226 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ApoeP08226 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ApoeP08226 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ApoeP08226 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ApoeP08226 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ApoeP08226 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
ApoeP08226 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ApoeP08226 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
ApoeP08226 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ApoeP08226 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ApoeP08226 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ApoeP08226 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.06□□□□□ -0.16
ApoeP08226 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ApoeP08226 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ApoeP08226 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.06□□□□□ -0.16
ApoeP08226 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
ApoeP08226 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ApoeP08226 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.05□□□□□ -0.16
ApoeP08226 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ApoeP08226 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ApoeP08226 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ApoeP08226 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ApoeP08226 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.05□□□□□ -0.16
ApoeP08226 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.05□□□□□ -0.16
ApoeP08226 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
ApoeP08226 Olfr129-201ENSMUST00000122318 993 ntBASIC14.05□□□□□ -0.16
ApoeP08226 Gm10499-201ENSMUST00000174094 934 ntBASIC14.05□□□□□ -0.16
ApoeP08226 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.05□□□□□ -0.16
ApoeP08226 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.05□□□□□ -0.16
ApoeP08226 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ApoeP08226 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.05□□□□□ -0.16
ApoeP08226 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
ApoeP08226 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ApoeP08226 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ApoeP08226 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ApoeP08226 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ApoeP08226 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ApoeP08226 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
ApoeP08226 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
ApoeP08226 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ApoeP08226 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ApoeP08226 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.04□□□□□ -0.16
ApoeP08226 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ApoeP08226 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms