Protein–RNA interactions for Protein: P04212

T-cell receptor beta chain V region LB2, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04212 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
P04212 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
P04212 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P04212 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
P04212 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
P04212 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P04212 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
P04212 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P04212 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
P04212 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P04212 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.08□□□□□ -0.48
P04212 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
P04212 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
P04212 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
P04212 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
P04212 Gm11185-201ENSMUST00000117732 1007 ntBASIC12.08□□□□□ -0.48
P04212 Gm13418-201ENSMUST00000119097 944 ntBASIC12.08□□□□□ -0.48
P04212 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
P04212 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P04212 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
P04212 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC12.08□□□□□ -0.48
P04212 AC159106.1-201ENSMUST00000224421 690 ntBASIC12.08□□□□□ -0.48
P04212 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
P04212 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P04212 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.08□□□□□ -0.48
P04212 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P04212 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.08□□□□□ -0.48
P04212 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
P04212 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.08□□□□□ -0.48
P04212 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
P04212 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
P04212 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P04212 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
P04212 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P04212 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
P04212 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.08□□□□□ -0.48
P04212 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
P04212 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
P04212 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P04212 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.08□□□□□ -0.48
P04212 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P04212 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P04212 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P04212 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P04212 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P04212 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
P04212 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P04212 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
P04212 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
P04212 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
P04212 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
P04212 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P04212 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
P04212 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
P04212 Gm2308-201ENSMUST00000166539 1004 ntBASIC12.07□□□□□ -0.48
P04212 Gm44357-201ENSMUST00000195897 142 ntBASIC12.07□□□□□ -0.48
P04212 Gm19658-201ENSMUST00000196231 138 ntBASIC12.07□□□□□ -0.48
P04212 Gm44367-201ENSMUST00000196836 138 ntBASIC12.07□□□□□ -0.48
P04212 Gm44350-201ENSMUST00000197197 138 ntBASIC12.07□□□□□ -0.48
P04212 Gm44390-201ENSMUST00000197533 144 ntBASIC12.07□□□□□ -0.48
P04212 Gm44313-201ENSMUST00000198018 138 ntBASIC12.07□□□□□ -0.48
P04212 Gm44486-201ENSMUST00000198508 138 ntBASIC12.07□□□□□ -0.48
P04212 Gm44314-201ENSMUST00000199263 138 ntBASIC12.07□□□□□ -0.48
P04212 Gm44394-201ENSMUST00000199558 138 ntBASIC12.07□□□□□ -0.48
P04212 Gm44484-201ENSMUST00000199873 138 ntBASIC12.07□□□□□ -0.48
P04212 Gm44466-201ENSMUST00000200264 138 ntBASIC12.07□□□□□ -0.48
P04212 Gm44359-201ENSMUST00000200671 138 ntBASIC12.07□□□□□ -0.48
P04212 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC12.07□□□□□ -0.48
P04212 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
P04212 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
P04212 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
P04212 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P04212 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
P04212 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
P04212 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
P04212 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P04212 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P04212 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.07□□□□□ -0.48
P04212 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
P04212 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
P04212 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
P04212 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
P04212 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
P04212 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
P04212 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
P04212 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
P04212 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
P04212 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.06□□□□□ -0.48
P04212 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
P04212 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
P04212 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
P04212 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
P04212 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
P04212 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
P04212 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.06□□□□□ -0.48
P04212 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
P04212 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
P04212 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
P04212 AC122901.1-201ENSMUST00000214203 1790 ntBASIC12.06□□□□□ -0.48
P04212 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms