Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
H3f3cP02301 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
H3f3cP02301 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
H3f3cP02301 BC037039-201ENSMUST00000192003 2205 ntBASIC12.76□□□□□ -0.37
H3f3cP02301 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
H3f3cP02301 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
H3f3cP02301 Gm11960-202ENSMUST00000181063 2858 ntBASIC12.75□□□□□ -0.37
H3f3cP02301 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H3f3cP02301 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H3f3cP02301 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H3f3cP02301 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
H3f3cP02301 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
H3f3cP02301 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H3f3cP02301 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H3f3cP02301 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
H3f3cP02301 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
H3f3cP02301 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H3f3cP02301 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
H3f3cP02301 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
H3f3cP02301 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H3f3cP02301 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H3f3cP02301 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
H3f3cP02301 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.75□□□□□ -0.37
H3f3cP02301 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
H3f3cP02301 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H3f3cP02301 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
H3f3cP02301 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
H3f3cP02301 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
H3f3cP02301 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
H3f3cP02301 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
H3f3cP02301 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H3f3cP02301 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
H3f3cP02301 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H3f3cP02301 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
H3f3cP02301 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
H3f3cP02301 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H3f3cP02301 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
H3f3cP02301 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
H3f3cP02301 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
H3f3cP02301 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
H3f3cP02301 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H3f3cP02301 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
H3f3cP02301 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
H3f3cP02301 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
H3f3cP02301 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H3f3cP02301 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
H3f3cP02301 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H3f3cP02301 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H3f3cP02301 Gm12008-201ENSMUST00000117791 755 ntBASIC12.74□□□□□ -0.37
H3f3cP02301 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC12.74□□□□□ -0.37
H3f3cP02301 Gm13597-201ENSMUST00000121239 375 ntBASIC12.74□□□□□ -0.37
H3f3cP02301 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.74□□□□□ -0.37
H3f3cP02301 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H3f3cP02301 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H3f3cP02301 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC12.74□□□□□ -0.37
H3f3cP02301 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H3f3cP02301 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
H3f3cP02301 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H3f3cP02301 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
H3f3cP02301 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
H3f3cP02301 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H3f3cP02301 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.74□□□□□ -0.37
H3f3cP02301 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H3f3cP02301 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
H3f3cP02301 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.74□□□□□ -0.37
H3f3cP02301 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H3f3cP02301 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
H3f3cP02301 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
H3f3cP02301 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
H3f3cP02301 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
H3f3cP02301 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC12.73□□□□□ -0.37
H3f3cP02301 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
H3f3cP02301 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
H3f3cP02301 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
H3f3cP02301 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
H3f3cP02301 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
H3f3cP02301 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
H3f3cP02301 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
H3f3cP02301 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
H3f3cP02301 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
H3f3cP02301 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
H3f3cP02301 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC12.73□□□□□ -0.37
H3f3cP02301 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
H3f3cP02301 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC12.73□□□□□ -0.37
H3f3cP02301 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC12.73□□□□□ -0.37
H3f3cP02301 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC12.73□□□□□ -0.37
H3f3cP02301 Gm27525-201ENSMUST00000184465 107 ntBASIC12.73□□□□□ -0.37
H3f3cP02301 Gm2272-201ENSMUST00000194903 582 ntBASIC12.73□□□□□ -0.37
H3f3cP02301 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
H3f3cP02301 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
H3f3cP02301 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
H3f3cP02301 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
H3f3cP02301 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
H3f3cP02301 AC025913.2-201ENSMUST00000220136 1766 ntBASIC12.73□□□□□ -0.37
H3f3cP02301 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
H3f3cP02301 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
H3f3cP02301 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
H3f3cP02301 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
H3f3cP02301 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
H3f3cP02301 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms