Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
P01852 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC13.59□□□□□ -0.23
P01852 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.59□□□□□ -0.23
P01852 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.59□□□□□ -0.23
P01852 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
P01852 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC13.59□□□□□ -0.23
P01852 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.59□□□□□ -0.23
P01852 Gm17968-201ENSMUST00000194902 784 ntBASIC13.59□□□□□ -0.23
P01852 Gm44492-201ENSMUST00000197012 141 ntBASIC13.59□□□□□ -0.23
P01852 CT943659.1-201ENSMUST00000215459 326 ntBASIC13.59□□□□□ -0.23
P01852 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
P01852 Ndufaf2-202ENSMUST00000223734 556 ntBASIC13.59□□□□□ -0.23
P01852 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
P01852 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
P01852 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
P01852 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
P01852 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
P01852 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
P01852 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
P01852 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
P01852 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
P01852 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.59□□□□□ -0.23
P01852 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
P01852 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
P01852 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
P01852 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
P01852 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC13.58□□□□□ -0.23
P01852 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
P01852 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
P01852 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.23
P01852 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
P01852 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
P01852 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
P01852 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
P01852 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
P01852 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
P01852 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
P01852 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
P01852 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
P01852 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
P01852 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
P01852 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.58□□□□□ -0.24
P01852 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13.58□□□□□ -0.24
P01852 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
P01852 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
P01852 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
P01852 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
P01852 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
P01852 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.58□□□□□ -0.24
P01852 Gm45747-201ENSMUST00000212203 999 ntBASIC13.58□□□□□ -0.24
P01852 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
P01852 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
P01852 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
P01852 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
P01852 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
P01852 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.58□□□□□ -0.24
P01852 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
P01852 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
P01852 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
P01852 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
P01852 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
P01852 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
P01852 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
P01852 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
P01852 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
P01852 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
P01852 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
P01852 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
P01852 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
P01852 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.57□□□□□ -0.24
P01852 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.57□□□□□ -0.24
P01852 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
P01852 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
P01852 Celf4-206ENSMUST00000224553 1729 ntBASIC13.57□□□□□ -0.24
P01852 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
P01852 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
P01852 Gm4913-201ENSMUST00000117075 1290 ntBASIC13.57□□□□□ -0.24
P01852 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC13.57□□□□□ -0.24
P01852 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC13.57□□□□□ -0.24
P01852 Gm2756-201ENSMUST00000195851 400 ntBASIC13.57□□□□□ -0.24
P01852 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.57□□□□□ -0.24
P01852 AC225888.1-201ENSMUST00000227184 728 ntBASIC13.57□□□□□ -0.24
P01852 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
P01852 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
P01852 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
P01852 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
P01852 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
P01852 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
P01852 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.57□□□□□ -0.24
P01852 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
P01852 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
P01852 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.57□□□□□ -0.24
P01852 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
P01852 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
P01852 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
P01852 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
P01852 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
P01852 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
P01852 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.56□□□□□ -0.24
P01852 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms