Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.47□□□□□ -0.25
Abcd4O89016 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Abcd4O89016 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Abcd4O89016 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Abcd4O89016 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Abcd4O89016 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Abcd4O89016 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Abcd4O89016 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Abcd4O89016 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Abcd4O89016 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Abcd4O89016 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
Abcd4O89016 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Abcd4O89016 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.47□□□□□ -0.25
Abcd4O89016 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.47□□□□□ -0.25
Abcd4O89016 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13.47□□□□□ -0.25
Abcd4O89016 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Abcd4O89016 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Abcd4O89016 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Abcd4O89016 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Abcd4O89016 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Abcd4O89016 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Abcd4O89016 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Abcd4O89016 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Abcd4O89016 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.47□□□□□ -0.25
Abcd4O89016 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Abcd4O89016 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Abcd4O89016 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Abcd4O89016 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Abcd4O89016 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Abcd4O89016 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Abcd4O89016 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Abcd4O89016 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Abcd4O89016 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.47□□□□□ -0.25
Abcd4O89016 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Abcd4O89016 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.47□□□□□ -0.25
Abcd4O89016 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.47□□□□□ -0.25
Abcd4O89016 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Abcd4O89016 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Abcd4O89016 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.46□□□□□ -0.25
Abcd4O89016 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Abcd4O89016 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Abcd4O89016 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Abcd4O89016 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Abcd4O89016 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Abcd4O89016 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Abcd4O89016 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.46□□□□□ -0.25
Abcd4O89016 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Abcd4O89016 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Abcd4O89016 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC13.46□□□□□ -0.25
Abcd4O89016 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Abcd4O89016 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.46□□□□□ -0.25
Abcd4O89016 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Abcd4O89016 Gm10576-201ENSMUST00000191927 825 ntBASIC13.46□□□□□ -0.25
Abcd4O89016 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.46□□□□□ -0.25
Abcd4O89016 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC13.46□□□□□ -0.25
Abcd4O89016 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.46□□□□□ -0.25
Abcd4O89016 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.46□□□□□ -0.25
Abcd4O89016 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Abcd4O89016 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Abcd4O89016 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.46□□□□□ -0.25
Abcd4O89016 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Abcd4O89016 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Abcd4O89016 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Abcd4O89016 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC13.46□□□□□ -0.26
Abcd4O89016 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Abcd4O89016 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Abcd4O89016 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Abcd4O89016 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Abcd4O89016 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Abcd4O89016 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Abcd4O89016 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Abcd4O89016 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Abcd4O89016 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Abcd4O89016 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC13.45□□□□□ -0.26
Abcd4O89016 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Abcd4O89016 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Abcd4O89016 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Abcd4O89016 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Abcd4O89016 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Abcd4O89016 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Abcd4O89016 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Abcd4O89016 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Abcd4O89016 Gm5184-201ENSMUST00000220417 1702 ntBASIC13.45□□□□□ -0.26
Abcd4O89016 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Abcd4O89016 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Abcd4O89016 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
Abcd4O89016 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Abcd4O89016 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Abcd4O89016 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Abcd4O89016 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Abcd4O89016 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Abcd4O89016 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Abcd4O89016 Gm10499-201ENSMUST00000174094 934 ntBASIC13.45□□□□□ -0.26
Abcd4O89016 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Abcd4O89016 Gm45747-201ENSMUST00000212203 999 ntBASIC13.45□□□□□ -0.26
Abcd4O89016 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Abcd4O89016 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Abcd4O89016 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13.45□□□□□ -0.26
Abcd4O89016 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Abcd4O89016 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms