Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sh2d1aO88890 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC10.54□□□□□ -0.72
Sh2d1aO88890 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sh2d1aO88890 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sh2d1aO88890 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sh2d1aO88890 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sh2d1aO88890 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Sh2d1aO88890 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sh2d1aO88890 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sh2d1aO88890 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC10.53□□□□□ -0.72
Sh2d1aO88890 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sh2d1aO88890 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sh2d1aO88890 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sh2d1aO88890 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC10.53□□□□□ -0.72
Sh2d1aO88890 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sh2d1aO88890 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sh2d1aO88890 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Sh2d1aO88890 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sh2d1aO88890 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Sh2d1aO88890 Gm25990-201ENSMUST00000102440 86 ntBASIC10.53□□□□□ -0.72
Sh2d1aO88890 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Sh2d1aO88890 Gm11453-201ENSMUST00000117318 1007 ntBASIC10.53□□□□□ -0.72
Sh2d1aO88890 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC10.53□□□□□ -0.72
Sh2d1aO88890 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC10.53□□□□□ -0.72
Sh2d1aO88890 Gm6089-201ENSMUST00000197666 938 ntBASIC10.53□□□□□ -0.72
Sh2d1aO88890 Gm7556-201ENSMUST00000201178 1084 ntBASIC10.53□□□□□ -0.72
Sh2d1aO88890 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sh2d1aO88890 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sh2d1aO88890 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Sh2d1aO88890 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sh2d1aO88890 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sh2d1aO88890 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sh2d1aO88890 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC10.53□□□□□ -0.72
Sh2d1aO88890 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Sh2d1aO88890 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC10.53□□□□□ -0.72
Sh2d1aO88890 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sh2d1aO88890 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Sh2d1aO88890 Gm3928-201ENSMUST00000121141 1307 ntBASIC10.53□□□□□ -0.72
Sh2d1aO88890 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sh2d1aO88890 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sh2d1aO88890 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Sh2d1aO88890 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC10.53□□□□□ -0.72
Sh2d1aO88890 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Sh2d1aO88890 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
Sh2d1aO88890 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Sh2d1aO88890 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
Sh2d1aO88890 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Sh2d1aO88890 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Sh2d1aO88890 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Sh2d1aO88890 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC10.52□□□□□ -0.72
Sh2d1aO88890 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Sh2d1aO88890 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Sh2d1aO88890 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.72
Sh2d1aO88890 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Sh2d1aO88890 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Sh2d1aO88890 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Sh2d1aO88890 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sh2d1aO88890 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sh2d1aO88890 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sh2d1aO88890 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sh2d1aO88890 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sh2d1aO88890 Gm7153-201ENSMUST00000117092 455 ntBASIC10.52□□□□□ -0.73
Sh2d1aO88890 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC10.52□□□□□ -0.73
Sh2d1aO88890 Gm5864-201ENSMUST00000202263 970 ntBASIC10.52□□□□□ -0.73
Sh2d1aO88890 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC10.52□□□□□ -0.73
Sh2d1aO88890 AC151836.1-202ENSMUST00000226259 753 ntBASIC10.52□□□□□ -0.73
Sh2d1aO88890 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sh2d1aO88890 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC10.52□□□□□ -0.73
Sh2d1aO88890 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sh2d1aO88890 Rps4l-201ENSMUST00000071745 943 ntBASIC10.52□□□□□ -0.73
Sh2d1aO88890 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sh2d1aO88890 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sh2d1aO88890 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sh2d1aO88890 Gm44291-201ENSMUST00000203102 2865 ntBASIC10.52□□□□□ -0.73
Sh2d1aO88890 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sh2d1aO88890 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sh2d1aO88890 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sh2d1aO88890 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sh2d1aO88890 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sh2d1aO88890 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sh2d1aO88890 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Sh2d1aO88890 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sh2d1aO88890 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sh2d1aO88890 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sh2d1aO88890 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC10.52□□□□□ -0.73
Sh2d1aO88890 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sh2d1aO88890 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sh2d1aO88890 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sh2d1aO88890 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Sh2d1aO88890 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sh2d1aO88890 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sh2d1aO88890 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sh2d1aO88890 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sh2d1aO88890 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sh2d1aO88890 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sh2d1aO88890 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Sh2d1aO88890 Gm14780-201ENSMUST00000118387 2737 ntBASIC10.51□□□□□ -0.73
Sh2d1aO88890 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sh2d1aO88890 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sh2d1aO88890 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms