Protein–RNA interactions for Protein: O88879

Apaf1, Apoptotic protease-activating factor 1, mousemouse

Predictions only

Length 1,249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apaf1O88879 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Apaf1O88879 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Apaf1O88879 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Apaf1O88879 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Apaf1O88879 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Apaf1O88879 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC19.28■□□□□ 0.68
Apaf1O88879 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Apaf1O88879 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Apaf1O88879 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Apaf1O88879 Zkscan3-208ENSMUST00000224820 5398 ntBASIC19.28■□□□□ 0.68
Apaf1O88879 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Apaf1O88879 Gm11543-201ENSMUST00000120758 370 ntBASIC19.28■□□□□ 0.68
Apaf1O88879 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Apaf1O88879 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Apaf1O88879 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC19.28■□□□□ 0.68
Apaf1O88879 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Apaf1O88879 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Apaf1O88879 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Apaf1O88879 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Apaf1O88879 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Apaf1O88879 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Apaf1O88879 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Apaf1O88879 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Apaf1O88879 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Apaf1O88879 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Apaf1O88879 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Apaf1O88879 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Apaf1O88879 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Apaf1O88879 Gm8749-201ENSMUST00000117737 331 ntBASIC19.27■□□□□ 0.68
Apaf1O88879 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
Apaf1O88879 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Apaf1O88879 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Apaf1O88879 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Apaf1O88879 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Apaf1O88879 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Apaf1O88879 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Apaf1O88879 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Apaf1O88879 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Apaf1O88879 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Apaf1O88879 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Apaf1O88879 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Apaf1O88879 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Apaf1O88879 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Apaf1O88879 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Apaf1O88879 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Apaf1O88879 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Apaf1O88879 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Apaf1O88879 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC19.26■□□□□ 0.67
Apaf1O88879 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Apaf1O88879 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC19.26■□□□□ 0.67
Apaf1O88879 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Apaf1O88879 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
Apaf1O88879 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Apaf1O88879 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Apaf1O88879 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Apaf1O88879 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Apaf1O88879 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC19.26■□□□□ 0.67
Apaf1O88879 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Apaf1O88879 Gm5479-201ENSMUST00000160578 435 ntBASIC19.26■□□□□ 0.67
Apaf1O88879 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC19.26■□□□□ 0.67
Apaf1O88879 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Apaf1O88879 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC19.26■□□□□ 0.67
Apaf1O88879 AC139382.1-201ENSMUST00000221402 498 ntBASIC19.26■□□□□ 0.67
Apaf1O88879 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Apaf1O88879 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Apaf1O88879 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Apaf1O88879 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC19.26■□□□□ 0.67
Apaf1O88879 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Apaf1O88879 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Apaf1O88879 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Apaf1O88879 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Apaf1O88879 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Apaf1O88879 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Apaf1O88879 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Apaf1O88879 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC19.25■□□□□ 0.67
Apaf1O88879 Camk2g-217ENSMUST00000226630 1937 ntBASIC19.25■□□□□ 0.67
Apaf1O88879 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Apaf1O88879 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Apaf1O88879 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Apaf1O88879 Gm9768-201ENSMUST00000206007 2861 ntBASIC19.25■□□□□ 0.67
Apaf1O88879 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Apaf1O88879 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Apaf1O88879 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Apaf1O88879 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC19.25■□□□□ 0.67
Apaf1O88879 Gm4691-201ENSMUST00000182339 1000 ntBASIC19.25■□□□□ 0.67
Apaf1O88879 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Apaf1O88879 Gm2451-201ENSMUST00000199447 999 ntBASIC19.25■□□□□ 0.67
Apaf1O88879 Gm10290-201ENSMUST00000200451 999 ntBASIC19.25■□□□□ 0.67
Apaf1O88879 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Apaf1O88879 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Apaf1O88879 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Apaf1O88879 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Apaf1O88879 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Apaf1O88879 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Apaf1O88879 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Apaf1O88879 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Apaf1O88879 Gm37305-201ENSMUST00000195714 4279 ntBASIC19.24■□□□□ 0.67
Apaf1O88879 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Apaf1O88879 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Apaf1O88879 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms