Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
ClppO88696 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
ClppO88696 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ClppO88696 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ClppO88696 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ClppO88696 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ClppO88696 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ClppO88696 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ClppO88696 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ClppO88696 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ClppO88696 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ClppO88696 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.53□□□□□ -0.08
ClppO88696 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ClppO88696 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ClppO88696 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ClppO88696 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ClppO88696 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ClppO88696 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
ClppO88696 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
ClppO88696 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ClppO88696 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ClppO88696 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ClppO88696 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ClppO88696 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ClppO88696 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
ClppO88696 Gm13597-201ENSMUST00000121239 375 ntBASIC14.52□□□□□ -0.09
ClppO88696 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ClppO88696 Gm5177-201ENSMUST00000183092 997 ntBASIC14.52□□□□□ -0.09
ClppO88696 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.52□□□□□ -0.09
ClppO88696 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
ClppO88696 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ClppO88696 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ClppO88696 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ClppO88696 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ClppO88696 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
ClppO88696 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ClppO88696 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.52□□□□□ -0.09
ClppO88696 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.52□□□□□ -0.09
ClppO88696 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ClppO88696 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ClppO88696 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
ClppO88696 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
ClppO88696 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ClppO88696 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
ClppO88696 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
ClppO88696 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ClppO88696 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ClppO88696 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ClppO88696 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ClppO88696 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ClppO88696 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ClppO88696 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.51□□□□□ -0.09
ClppO88696 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ClppO88696 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
ClppO88696 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
ClppO88696 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ClppO88696 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC14.51□□□□□ -0.09
ClppO88696 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.51□□□□□ -0.09
ClppO88696 Gm2272-201ENSMUST00000194903 582 ntBASIC14.51□□□□□ -0.09
ClppO88696 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.51□□□□□ -0.09
ClppO88696 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.51□□□□□ -0.09
ClppO88696 Thap2-203ENSMUST00000218989 527 ntBASIC14.51□□□□□ -0.09
ClppO88696 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ClppO88696 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ClppO88696 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ClppO88696 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.51□□□□□ -0.09
ClppO88696 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ClppO88696 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ClppO88696 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
ClppO88696 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ClppO88696 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
ClppO88696 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
ClppO88696 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
ClppO88696 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ClppO88696 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ClppO88696 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ClppO88696 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ClppO88696 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
ClppO88696 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ClppO88696 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
ClppO88696 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ClppO88696 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.5□□□□□ -0.09
ClppO88696 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
ClppO88696 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ClppO88696 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ClppO88696 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ClppO88696 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.5□□□□□ -0.09
ClppO88696 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
ClppO88696 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ClppO88696 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ClppO88696 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.5□□□□□ -0.09
ClppO88696 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ClppO88696 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
ClppO88696 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.5□□□□□ -0.09
ClppO88696 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.5□□□□□ -0.09
ClppO88696 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.5□□□□□ -0.09
ClppO88696 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ClppO88696 Gm8318-201ENSMUST00000182954 872 ntBASIC14.5□□□□□ -0.09
ClppO88696 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.5□□□□□ -0.09
ClppO88696 Gm17968-201ENSMUST00000194902 784 ntBASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms