Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cldn1O88551 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12.75□□□□□ -0.37
Cldn1O88551 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cldn1O88551 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cldn1O88551 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.75□□□□□ -0.37
Cldn1O88551 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Cldn1O88551 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cldn1O88551 Mir7684-201ENSMUST00000183858 60 ntBASIC12.75□□□□□ -0.37
Cldn1O88551 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC12.75□□□□□ -0.37
Cldn1O88551 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cldn1O88551 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC12.75□□□□□ -0.37
Cldn1O88551 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cldn1O88551 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cldn1O88551 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cldn1O88551 Gm6888-201ENSMUST00000221983 706 ntBASIC12.75□□□□□ -0.37
Cldn1O88551 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC12.75□□□□□ -0.37
Cldn1O88551 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC12.75□□□□□ -0.37
Cldn1O88551 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cldn1O88551 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cldn1O88551 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cldn1O88551 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cldn1O88551 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cldn1O88551 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cldn1O88551 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cldn1O88551 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cldn1O88551 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cldn1O88551 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cldn1O88551 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cldn1O88551 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cldn1O88551 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cldn1O88551 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cldn1O88551 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cldn1O88551 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cldn1O88551 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Cldn1O88551 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cldn1O88551 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cldn1O88551 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cldn1O88551 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cldn1O88551 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cldn1O88551 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Cldn1O88551 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cldn1O88551 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cldn1O88551 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cldn1O88551 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cldn1O88551 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Cldn1O88551 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cldn1O88551 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cldn1O88551 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cldn1O88551 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Cldn1O88551 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Cldn1O88551 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.74□□□□□ -0.37
Cldn1O88551 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Cldn1O88551 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cldn1O88551 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Cldn1O88551 Gm2272-201ENSMUST00000194903 582 ntBASIC12.74□□□□□ -0.37
Cldn1O88551 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cldn1O88551 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC12.74□□□□□ -0.37
Cldn1O88551 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Cldn1O88551 Gm7730-201ENSMUST00000212486 454 ntBASIC12.74□□□□□ -0.37
Cldn1O88551 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cldn1O88551 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cldn1O88551 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Cldn1O88551 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cldn1O88551 Gm19430-201ENSMUST00000193847 2137 ntBASIC12.74□□□□□ -0.37
Cldn1O88551 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cldn1O88551 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cldn1O88551 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
Cldn1O88551 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cldn1O88551 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cldn1O88551 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cldn1O88551 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cldn1O88551 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC12.73□□□□□ -0.37
Cldn1O88551 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cldn1O88551 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cldn1O88551 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Cldn1O88551 Gm13517-201ENSMUST00000120782 1495 ntBASIC12.73□□□□□ -0.37
Cldn1O88551 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Cldn1O88551 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cldn1O88551 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cldn1O88551 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cldn1O88551 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC12.73□□□□□ -0.37
Cldn1O88551 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cldn1O88551 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cldn1O88551 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cldn1O88551 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Cldn1O88551 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cldn1O88551 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cldn1O88551 Gm7286-201ENSMUST00000182691 1007 ntBASIC12.73□□□□□ -0.37
Cldn1O88551 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Cldn1O88551 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC12.73□□□□□ -0.37
Cldn1O88551 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Cldn1O88551 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cldn1O88551 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.73□□□□□ -0.37
Cldn1O88551 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cldn1O88551 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cldn1O88551 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cldn1O88551 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cldn1O88551 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cldn1O88551 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cldn1O88551 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms