Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cops6O88545 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cops6O88545 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC18.07■□□□□ 0.48
Cops6O88545 Mir1897-201ENSMUST00000122581 272 ntBASIC18.07■□□□□ 0.48
Cops6O88545 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC18.07■□□□□ 0.48
Cops6O88545 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cops6O88545 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Cops6O88545 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cops6O88545 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cops6O88545 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Cops6O88545 Gm7730-201ENSMUST00000212486 454 ntBASIC18.07■□□□□ 0.48
Cops6O88545 Arhgef33-209ENSMUST00000225223 714 ntBASIC18.07■□□□□ 0.48
Cops6O88545 AC132863.2-201ENSMUST00000226643 799 ntBASIC18.07■□□□□ 0.48
Cops6O88545 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cops6O88545 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cops6O88545 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cops6O88545 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Cops6O88545 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cops6O88545 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cops6O88545 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cops6O88545 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cops6O88545 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Cops6O88545 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cops6O88545 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cops6O88545 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC18.06■□□□□ 0.48
Cops6O88545 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cops6O88545 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cops6O88545 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cops6O88545 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cops6O88545 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cops6O88545 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cops6O88545 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC18.06■□□□□ 0.48
Cops6O88545 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cops6O88545 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cops6O88545 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cops6O88545 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cops6O88545 Olfr286-202ENSMUST00000205305 969 ntBASIC18.06■□□□□ 0.48
Cops6O88545 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cops6O88545 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cops6O88545 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cops6O88545 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cops6O88545 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cops6O88545 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cops6O88545 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cops6O88545 BC037039-201ENSMUST00000192003 2205 ntBASIC18.06■□□□□ 0.48
Cops6O88545 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cops6O88545 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cops6O88545 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cops6O88545 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cops6O88545 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cops6O88545 Syt7-204ENSMUST00000223586 1344 ntBASIC18.05■□□□□ 0.48
Cops6O88545 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cops6O88545 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC18.05■□□□□ 0.48
Cops6O88545 Gm5320-201ENSMUST00000207163 1519 ntBASIC18.05■□□□□ 0.48
Cops6O88545 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cops6O88545 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
Cops6O88545 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
Cops6O88545 Gm27631-201ENSMUST00000184163 466 ntBASIC18.05■□□□□ 0.48
Cops6O88545 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC18.05■□□□□ 0.48
Cops6O88545 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC18.05■□□□□ 0.48
Cops6O88545 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cops6O88545 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cops6O88545 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cops6O88545 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Cops6O88545 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cops6O88545 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC18.05■□□□□ 0.48
Cops6O88545 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cops6O88545 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cops6O88545 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cops6O88545 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cops6O88545 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cops6O88545 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cops6O88545 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cops6O88545 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cops6O88545 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cops6O88545 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC18.04■□□□□ 0.48
Cops6O88545 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cops6O88545 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Cops6O88545 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Cops6O88545 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cops6O88545 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC18.04■□□□□ 0.48
Cops6O88545 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cops6O88545 Gm16215-201ENSMUST00000161990 637 ntBASIC18.04■□□□□ 0.48
Cops6O88545 Gm9726-201ENSMUST00000180321 678 ntBASIC18.04■□□□□ 0.48
Cops6O88545 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cops6O88545 Gm27838-201ENSMUST00000184829 128 ntBASIC18.04■□□□□ 0.48
Cops6O88545 Gm37230-201ENSMUST00000194491 818 ntBASIC18.04■□□□□ 0.48
Cops6O88545 Gm16476-201ENSMUST00000221544 139 ntBASIC18.04■□□□□ 0.48
Cops6O88545 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cops6O88545 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Cops6O88545 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
Cops6O88545 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cops6O88545 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Cops6O88545 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cops6O88545 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cops6O88545 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cops6O88545 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC18.04■□□□□ 0.48
Cops6O88545 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cops6O88545 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cops6O88545 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms