Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cops4O88544 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cops4O88544 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cops4O88544 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Cops4O88544 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cops4O88544 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cops4O88544 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cops4O88544 Gm27742-201ENSMUST00000184667 60 ntBASIC13.74□□□□□ -0.21
Cops4O88544 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC13.74□□□□□ -0.21
Cops4O88544 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cops4O88544 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Cops4O88544 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cops4O88544 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Cops4O88544 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.74□□□□□ -0.21
Cops4O88544 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cops4O88544 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Cops4O88544 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cops4O88544 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.74□□□□□ -0.21
Cops4O88544 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.74□□□□□ -0.21
Cops4O88544 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cops4O88544 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cops4O88544 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cops4O88544 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cops4O88544 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cops4O88544 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Cops4O88544 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.73□□□□□ -0.21
Cops4O88544 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Cops4O88544 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cops4O88544 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cops4O88544 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cops4O88544 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
Cops4O88544 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cops4O88544 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cops4O88544 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.73□□□□□ -0.21
Cops4O88544 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cops4O88544 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cops4O88544 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
Cops4O88544 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cops4O88544 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cops4O88544 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.73□□□□□ -0.21
Cops4O88544 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
Cops4O88544 Mir3081-201ENSMUST00000175305 84 ntBASIC13.73□□□□□ -0.21
Cops4O88544 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cops4O88544 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cops4O88544 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cops4O88544 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Cops4O88544 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cops4O88544 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cops4O88544 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cops4O88544 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cops4O88544 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cops4O88544 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cops4O88544 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cops4O88544 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cops4O88544 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cops4O88544 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cops4O88544 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cops4O88544 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cops4O88544 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cops4O88544 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cops4O88544 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cops4O88544 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cops4O88544 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cops4O88544 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cops4O88544 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cops4O88544 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.72□□□□□ -0.21
Cops4O88544 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cops4O88544 Gm4609-201ENSMUST00000106443 1002 ntBASIC13.72□□□□□ -0.21
Cops4O88544 Gm5138-201ENSMUST00000113842 1002 ntBASIC13.72□□□□□ -0.21
Cops4O88544 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cops4O88544 Gm15191-201ENSMUST00000117933 1000 ntBASIC13.72□□□□□ -0.21
Cops4O88544 Gm12182-201ENSMUST00000118655 1008 ntBASIC13.72□□□□□ -0.21
Cops4O88544 Gm13882-201ENSMUST00000120886 1002 ntBASIC13.72□□□□□ -0.21
Cops4O88544 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC13.72□□□□□ -0.21
Cops4O88544 Gm10284-201ENSMUST00000145057 1005 ntBASIC13.72□□□□□ -0.21
Cops4O88544 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cops4O88544 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cops4O88544 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Cops4O88544 Gm10481-201ENSMUST00000179228 1002 ntBASIC13.72□□□□□ -0.21
Cops4O88544 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC13.72□□□□□ -0.21
Cops4O88544 Gm2574-201ENSMUST00000181051 1002 ntBASIC13.72□□□□□ -0.21
Cops4O88544 Gm3200-201ENSMUST00000181493 1002 ntBASIC13.72□□□□□ -0.21
Cops4O88544 Gm8825-201ENSMUST00000182565 998 ntBASIC13.72□□□□□ -0.21
Cops4O88544 Gm4518-201ENSMUST00000182638 718 ntBASIC13.72□□□□□ -0.21
Cops4O88544 Gm8330-201ENSMUST00000182754 1008 ntBASIC13.72□□□□□ -0.21
Cops4O88544 Gm4575-201ENSMUST00000182991 1002 ntBASIC13.72□□□□□ -0.21
Cops4O88544 Gm8709-201ENSMUST00000183230 1012 ntBASIC13.72□□□□□ -0.21
Cops4O88544 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cops4O88544 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cops4O88544 Gm10293-201ENSMUST00000076317 1002 ntBASIC13.72□□□□□ -0.21
Cops4O88544 Gm6316-201ENSMUST00000082064 1020 ntBASIC13.72□□□□□ -0.21
Cops4O88544 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cops4O88544 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cops4O88544 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cops4O88544 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Cops4O88544 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cops4O88544 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Cops4O88544 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cops4O88544 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cops4O88544 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms