Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Tgfbr3O88393 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tgfbr3O88393 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Tgfbr3O88393 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Tgfbr3O88393 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Tgfbr3O88393 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tgfbr3O88393 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.07□□□□□ -0.16
Tgfbr3O88393 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tgfbr3O88393 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Tgfbr3O88393 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tgfbr3O88393 Mir1897-201ENSMUST00000122581 272 ntBASIC14.07□□□□□ -0.16
Tgfbr3O88393 Gm29667-201ENSMUST00000190817 490 ntBASIC14.07□□□□□ -0.16
Tgfbr3O88393 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Tgfbr3O88393 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Tgfbr3O88393 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.07□□□□□ -0.16
Tgfbr3O88393 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC14.07□□□□□ -0.16
Tgfbr3O88393 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Tgfbr3O88393 Gm6218-201ENSMUST00000219812 628 ntBASIC14.07□□□□□ -0.16
Tgfbr3O88393 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.07□□□□□ -0.16
Tgfbr3O88393 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tgfbr3O88393 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Tgfbr3O88393 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tgfbr3O88393 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tgfbr3O88393 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tgfbr3O88393 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tgfbr3O88393 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.07□□□□□ -0.16
Tgfbr3O88393 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Tgfbr3O88393 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Tgfbr3O88393 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Tgfbr3O88393 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tgfbr3O88393 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tgfbr3O88393 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tgfbr3O88393 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tgfbr3O88393 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Tgfbr3O88393 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tgfbr3O88393 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tgfbr3O88393 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tgfbr3O88393 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Tgfbr3O88393 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tgfbr3O88393 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
Tgfbr3O88393 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tgfbr3O88393 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tgfbr3O88393 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Tgfbr3O88393 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tgfbr3O88393 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.06□□□□□ -0.16
Tgfbr3O88393 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.06□□□□□ -0.16
Tgfbr3O88393 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tgfbr3O88393 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tgfbr3O88393 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Tgfbr3O88393 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Tgfbr3O88393 Gm12859-201ENSMUST00000117834 427 ntBASIC14.06□□□□□ -0.16
Tgfbr3O88393 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Tgfbr3O88393 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Tgfbr3O88393 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.06□□□□□ -0.16
Tgfbr3O88393 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tgfbr3O88393 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Tgfbr3O88393 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Tgfbr3O88393 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Tgfbr3O88393 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Tgfbr3O88393 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tgfbr3O88393 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tgfbr3O88393 Gm6263-201ENSMUST00000120029 1342 ntBASIC14.06□□□□□ -0.16
Tgfbr3O88393 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Tgfbr3O88393 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tgfbr3O88393 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tgfbr3O88393 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Tgfbr3O88393 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tgfbr3O88393 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Tgfbr3O88393 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tgfbr3O88393 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tgfbr3O88393 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tgfbr3O88393 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tgfbr3O88393 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Tgfbr3O88393 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Tgfbr3O88393 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tgfbr3O88393 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tgfbr3O88393 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Tgfbr3O88393 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tgfbr3O88393 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tgfbr3O88393 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tgfbr3O88393 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Tgfbr3O88393 Gm14928-201ENSMUST00000120198 477 ntBASIC14.05□□□□□ -0.16
Tgfbr3O88393 Gm12490-201ENSMUST00000120255 560 ntBASIC14.05□□□□□ -0.16
Tgfbr3O88393 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.05□□□□□ -0.16
Tgfbr3O88393 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Tgfbr3O88393 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Tgfbr3O88393 AL593843.1-201ENSMUST00000195891 145 ntBASIC14.05□□□□□ -0.16
Tgfbr3O88393 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Tgfbr3O88393 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tgfbr3O88393 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Tgfbr3O88393 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Tgfbr3O88393 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Tgfbr3O88393 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tgfbr3O88393 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tgfbr3O88393 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Tgfbr3O88393 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tgfbr3O88393 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Tgfbr3O88393 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.05□□□□□ -0.16
Tgfbr3O88393 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Tgfbr3O88393 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms