Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vti1bO88384 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vti1bO88384 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vti1bO88384 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vti1bO88384 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vti1bO88384 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vti1bO88384 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vti1bO88384 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vti1bO88384 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vti1bO88384 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vti1bO88384 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Vti1bO88384 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vti1bO88384 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vti1bO88384 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vti1bO88384 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Vti1bO88384 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vti1bO88384 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.18□□□□□ -0.14
Vti1bO88384 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.18□□□□□ -0.14
Vti1bO88384 Gm27646-201ENSMUST00000183989 110 ntBASIC14.18□□□□□ -0.14
Vti1bO88384 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.18□□□□□ -0.14
Vti1bO88384 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.18□□□□□ -0.14
Vti1bO88384 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.18□□□□□ -0.14
Vti1bO88384 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.18□□□□□ -0.14
Vti1bO88384 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.18□□□□□ -0.14
Vti1bO88384 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vti1bO88384 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vti1bO88384 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vti1bO88384 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Vti1bO88384 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Vti1bO88384 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vti1bO88384 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Vti1bO88384 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vti1bO88384 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vti1bO88384 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Vti1bO88384 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vti1bO88384 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.17□□□□□ -0.14
Vti1bO88384 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vti1bO88384 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vti1bO88384 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vti1bO88384 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Vti1bO88384 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vti1bO88384 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vti1bO88384 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vti1bO88384 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.17□□□□□ -0.14
Vti1bO88384 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC14.17□□□□□ -0.14
Vti1bO88384 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vti1bO88384 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Vti1bO88384 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vti1bO88384 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.17□□□□□ -0.14
Vti1bO88384 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Vti1bO88384 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Vti1bO88384 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vti1bO88384 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.17□□□□□ -0.14
Vti1bO88384 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.17□□□□□ -0.14
Vti1bO88384 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.17□□□□□ -0.14
Vti1bO88384 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.17□□□□□ -0.14
Vti1bO88384 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vti1bO88384 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vti1bO88384 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vti1bO88384 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vti1bO88384 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vti1bO88384 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vti1bO88384 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vti1bO88384 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vti1bO88384 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.17□□□□□ -0.14
Vti1bO88384 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vti1bO88384 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vti1bO88384 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.17□□□□□ -0.14
Vti1bO88384 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vti1bO88384 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vti1bO88384 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vti1bO88384 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vti1bO88384 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vti1bO88384 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Vti1bO88384 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vti1bO88384 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vti1bO88384 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vti1bO88384 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vti1bO88384 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Vti1bO88384 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vti1bO88384 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Vti1bO88384 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vti1bO88384 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.16□□□□□ -0.14
Vti1bO88384 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vti1bO88384 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vti1bO88384 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Vti1bO88384 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Vti1bO88384 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vti1bO88384 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Vti1bO88384 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vti1bO88384 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vti1bO88384 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vti1bO88384 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vti1bO88384 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Vti1bO88384 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Vti1bO88384 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vti1bO88384 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.16□□□□□ -0.14
Vti1bO88384 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vti1bO88384 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Vti1bO88384 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms