Protein–RNA interactions for Protein: O70480

Vamp4, Vesicle-associated membrane protein 4, mousemouse

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp4O70480 Gm37230-201ENSMUST00000194491 818 ntBASIC18.69■□□□□ 0.58
Vamp4O70480 Gm45098-201ENSMUST00000207179 657 ntBASIC18.69■□□□□ 0.58
Vamp4O70480 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vamp4O70480 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vamp4O70480 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Vamp4O70480 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vamp4O70480 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vamp4O70480 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Vamp4O70480 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC18.69■□□□□ 0.58
Vamp4O70480 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vamp4O70480 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vamp4O70480 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vamp4O70480 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vamp4O70480 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Vamp4O70480 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Vamp4O70480 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Vamp4O70480 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vamp4O70480 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC18.68■□□□□ 0.58
Vamp4O70480 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vamp4O70480 Gm22065-201ENSMUST00000103753 110 ntBASIC18.68■□□□□ 0.58
Vamp4O70480 Gm22066-201ENSMUST00000103761 110 ntBASIC18.68■□□□□ 0.58
Vamp4O70480 Gm24932-201ENSMUST00000103763 110 ntBASIC18.68■□□□□ 0.58
Vamp4O70480 Gm24115-201ENSMUST00000103799 110 ntBASIC18.68■□□□□ 0.58
Vamp4O70480 Gm22190-201ENSMUST00000103827 110 ntBASIC18.68■□□□□ 0.58
Vamp4O70480 Gm22191-201ENSMUST00000103831 110 ntBASIC18.68■□□□□ 0.58
Vamp4O70480 Gm25287-201ENSMUST00000103846 110 ntBASIC18.68■□□□□ 0.58
Vamp4O70480 Gm24721-201ENSMUST00000103849 110 ntBASIC18.68■□□□□ 0.58
Vamp4O70480 Gm22918-201ENSMUST00000103855 110 ntBASIC18.68■□□□□ 0.58
Vamp4O70480 Gm28018-201ENSMUST00000103869 110 ntBASIC18.68■□□□□ 0.58
Vamp4O70480 Gm26399-201ENSMUST00000103937 110 ntBASIC18.68■□□□□ 0.58
Vamp4O70480 Gm13015-201ENSMUST00000118674 204 ntBASIC18.68■□□□□ 0.58
Vamp4O70480 Gm25349-201ENSMUST00000177728 110 ntBASIC18.68■□□□□ 0.58
Vamp4O70480 Gm23616-201ENSMUST00000177797 110 ntBASIC18.68■□□□□ 0.58
Vamp4O70480 Gm25871-201ENSMUST00000177816 110 ntBASIC18.68■□□□□ 0.58
Vamp4O70480 Gm24752-201ENSMUST00000178240 110 ntBASIC18.68■□□□□ 0.58
Vamp4O70480 Gm24496-201ENSMUST00000178287 110 ntBASIC18.68■□□□□ 0.58
Vamp4O70480 Gm25649-201ENSMUST00000178476 110 ntBASIC18.68■□□□□ 0.58
Vamp4O70480 Gm25548-201ENSMUST00000178681 110 ntBASIC18.68■□□□□ 0.58
Vamp4O70480 Gm23147-201ENSMUST00000178841 110 ntBASIC18.68■□□□□ 0.58
Vamp4O70480 Gm26095-201ENSMUST00000179270 110 ntBASIC18.68■□□□□ 0.58
Vamp4O70480 Gm22171-201ENSMUST00000179283 110 ntBASIC18.68■□□□□ 0.58
Vamp4O70480 Gm23936-201ENSMUST00000179354 110 ntBASIC18.68■□□□□ 0.58
Vamp4O70480 Gm22619-201ENSMUST00000179516 110 ntBASIC18.68■□□□□ 0.58
Vamp4O70480 Gm25255-201ENSMUST00000179579 110 ntBASIC18.68■□□□□ 0.58
Vamp4O70480 Gm24755-201ENSMUST00000179691 110 ntBASIC18.68■□□□□ 0.58
Vamp4O70480 Gm26506-201ENSMUST00000179692 110 ntBASIC18.68■□□□□ 0.58
Vamp4O70480 Gm25086-201ENSMUST00000179931 110 ntBASIC18.68■□□□□ 0.58
Vamp4O70480 Gm23243-201ENSMUST00000180047 110 ntBASIC18.68■□□□□ 0.58
Vamp4O70480 Gm24659-201ENSMUST00000180212 110 ntBASIC18.68■□□□□ 0.58
Vamp4O70480 Gm24169-201ENSMUST00000180244 110 ntBASIC18.68■□□□□ 0.58
Vamp4O70480 Gm23689-201ENSMUST00000180354 110 ntBASIC18.68■□□□□ 0.58
Vamp4O70480 Gm27359-201ENSMUST00000184153 110 ntBASIC18.68■□□□□ 0.58
Vamp4O70480 Gm27785-201ENSMUST00000184268 110 ntBASIC18.68■□□□□ 0.58
Vamp4O70480 Gm27466-201ENSMUST00000184396 110 ntBASIC18.68■□□□□ 0.58
Vamp4O70480 Gm27703-201ENSMUST00000184836 110 ntBASIC18.68■□□□□ 0.58
Vamp4O70480 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Vamp4O70480 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC18.68■□□□□ 0.58
Vamp4O70480 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Vamp4O70480 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vamp4O70480 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vamp4O70480 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC18.68■□□□□ 0.58
Vamp4O70480 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vamp4O70480 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC18.68■□□□□ 0.58
Vamp4O70480 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Vamp4O70480 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vamp4O70480 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vamp4O70480 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Vamp4O70480 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vamp4O70480 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vamp4O70480 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vamp4O70480 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vamp4O70480 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC18.67■□□□□ 0.58
Vamp4O70480 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC18.67■□□□□ 0.58
Vamp4O70480 Gm38225-201ENSMUST00000194001 393 ntBASIC18.67■□□□□ 0.58
Vamp4O70480 Gm5312-201ENSMUST00000203728 547 ntBASIC18.67■□□□□ 0.58
Vamp4O70480 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC18.67■□□□□ 0.58
Vamp4O70480 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Vamp4O70480 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC18.67■□□□□ 0.58
Vamp4O70480 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
Vamp4O70480 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vamp4O70480 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vamp4O70480 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vamp4O70480 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vamp4O70480 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vamp4O70480 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Vamp4O70480 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vamp4O70480 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vamp4O70480 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Vamp4O70480 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vamp4O70480 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Vamp4O70480 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Vamp4O70480 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vamp4O70480 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vamp4O70480 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Vamp4O70480 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Vamp4O70480 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vamp4O70480 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vamp4O70480 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vamp4O70480 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Vamp4O70480 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms