Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pdlim1O70400 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pdlim1O70400 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pdlim1O70400 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pdlim1O70400 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pdlim1O70400 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Pdlim1O70400 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Pdlim1O70400 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pdlim1O70400 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pdlim1O70400 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pdlim1O70400 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pdlim1O70400 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Pdlim1O70400 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pdlim1O70400 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pdlim1O70400 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pdlim1O70400 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Pdlim1O70400 Gm4995-201ENSMUST00000117247 432 ntBASIC14.65□□□□□ -0.06
Pdlim1O70400 Mir1895-201ENSMUST00000122615 79 ntBASIC14.65□□□□□ -0.06
Pdlim1O70400 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Pdlim1O70400 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
Pdlim1O70400 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
Pdlim1O70400 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Pdlim1O70400 Gm24513-201ENSMUST00000174964 138 ntBASIC14.65□□□□□ -0.06
Pdlim1O70400 Gm27397-201ENSMUST00000184997 107 ntBASIC14.65□□□□□ -0.06
Pdlim1O70400 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.65□□□□□ -0.06
Pdlim1O70400 Gm37935-201ENSMUST00000192012 982 ntBASIC14.65□□□□□ -0.06
Pdlim1O70400 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pdlim1O70400 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pdlim1O70400 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pdlim1O70400 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pdlim1O70400 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.65□□□□□ -0.06
Pdlim1O70400 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pdlim1O70400 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pdlim1O70400 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pdlim1O70400 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pdlim1O70400 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pdlim1O70400 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.65□□□□□ -0.06
Pdlim1O70400 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pdlim1O70400 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pdlim1O70400 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Pdlim1O70400 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pdlim1O70400 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pdlim1O70400 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Pdlim1O70400 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
Pdlim1O70400 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.65□□□□□ -0.07
Pdlim1O70400 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pdlim1O70400 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.64□□□□□ -0.07
Pdlim1O70400 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pdlim1O70400 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pdlim1O70400 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pdlim1O70400 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pdlim1O70400 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.64□□□□□ -0.07
Pdlim1O70400 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pdlim1O70400 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.64□□□□□ -0.07
Pdlim1O70400 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pdlim1O70400 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pdlim1O70400 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pdlim1O70400 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pdlim1O70400 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pdlim1O70400 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pdlim1O70400 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pdlim1O70400 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pdlim1O70400 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pdlim1O70400 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pdlim1O70400 Gm27494-201ENSMUST00000184735 189 ntBASIC14.64□□□□□ -0.07
Pdlim1O70400 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Pdlim1O70400 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pdlim1O70400 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pdlim1O70400 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pdlim1O70400 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pdlim1O70400 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pdlim1O70400 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pdlim1O70400 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Pdlim1O70400 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pdlim1O70400 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Pdlim1O70400 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pdlim1O70400 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pdlim1O70400 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pdlim1O70400 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pdlim1O70400 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pdlim1O70400 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pdlim1O70400 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pdlim1O70400 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pdlim1O70400 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.63□□□□□ -0.07
Pdlim1O70400 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Pdlim1O70400 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pdlim1O70400 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pdlim1O70400 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pdlim1O70400 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.63□□□□□ -0.07
Pdlim1O70400 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.63□□□□□ -0.07
Pdlim1O70400 Gm18737-201ENSMUST00000173594 937 ntBASIC14.63□□□□□ -0.07
Pdlim1O70400 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pdlim1O70400 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.63□□□□□ -0.07
Pdlim1O70400 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Pdlim1O70400 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.63□□□□□ -0.07
Pdlim1O70400 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pdlim1O70400 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pdlim1O70400 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pdlim1O70400 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
Pdlim1O70400 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms