Protein–RNA interactions for Protein: O70137

Alx3, Homeobox protein aristaless-like 3, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx3O70137 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Alx3O70137 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Alx3O70137 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Alx3O70137 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Alx3O70137 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Alx3O70137 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC13.56□□□□□ -0.24
Alx3O70137 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Alx3O70137 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC13.56□□□□□ -0.24
Alx3O70137 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Alx3O70137 Cmtm5-203ENSMUST00000227441 610 ntBASIC13.56□□□□□ -0.24
Alx3O70137 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13.56□□□□□ -0.24
Alx3O70137 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Alx3O70137 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Alx3O70137 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Alx3O70137 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Alx3O70137 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Alx3O70137 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Alx3O70137 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Alx3O70137 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Alx3O70137 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Alx3O70137 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Alx3O70137 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Alx3O70137 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.56□□□□□ -0.24
Alx3O70137 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Alx3O70137 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Alx3O70137 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.56□□□□□ -0.24
Alx3O70137 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Alx3O70137 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Alx3O70137 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.55□□□□□ -0.24
Alx3O70137 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Alx3O70137 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Alx3O70137 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Alx3O70137 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Alx3O70137 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Alx3O70137 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Alx3O70137 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Alx3O70137 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Alx3O70137 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Alx3O70137 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Alx3O70137 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Alx3O70137 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Alx3O70137 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Alx3O70137 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Alx3O70137 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Alx3O70137 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC13.55□□□□□ -0.24
Alx3O70137 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Alx3O70137 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC13.55□□□□□ -0.24
Alx3O70137 AC159301.1-201ENSMUST00000225130 1182 ntBASIC13.55□□□□□ -0.24
Alx3O70137 AC154757.1-201ENSMUST00000228289 336 ntBASIC13.55□□□□□ -0.24
Alx3O70137 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Alx3O70137 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Alx3O70137 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Alx3O70137 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Alx3O70137 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Alx3O70137 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Alx3O70137 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Alx3O70137 Celf4-206ENSMUST00000224553 1729 ntBASIC13.55□□□□□ -0.24
Alx3O70137 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Alx3O70137 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Alx3O70137 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.55□□□□□ -0.24
Alx3O70137 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Alx3O70137 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Alx3O70137 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Alx3O70137 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
Alx3O70137 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Alx3O70137 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Alx3O70137 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.54□□□□□ -0.24
Alx3O70137 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Alx3O70137 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Alx3O70137 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Alx3O70137 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Alx3O70137 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Alx3O70137 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Alx3O70137 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Alx3O70137 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Alx3O70137 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Alx3O70137 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC13.54□□□□□ -0.24
Alx3O70137 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Alx3O70137 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Alx3O70137 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Alx3O70137 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Alx3O70137 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC13.54□□□□□ -0.24
Alx3O70137 Gm18489-201ENSMUST00000172565 551 ntBASIC13.54□□□□□ -0.24
Alx3O70137 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Alx3O70137 Ank2-226ENSMUST00000189368 339 ntBASIC13.54□□□□□ -0.24
Alx3O70137 Gm6546-201ENSMUST00000192096 766 ntBASIC13.54□□□□□ -0.24
Alx3O70137 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Alx3O70137 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Alx3O70137 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Alx3O70137 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.54□□□□□ -0.24
Alx3O70137 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Alx3O70137 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Alx3O70137 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Alx3O70137 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Alx3O70137 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
Alx3O70137 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Alx3O70137 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Alx3O70137 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Alx3O70137 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Alx3O70137 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms