Protein–RNA interactions for Protein: O55176

Pja1, E3 ubiquitin-protein ligase Praja-1, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pja1O55176 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pja1O55176 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pja1O55176 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pja1O55176 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pja1O55176 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pja1O55176 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Pja1O55176 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC15.69■□□□□ 0.1
Pja1O55176 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pja1O55176 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC15.69■□□□□ 0.1
Pja1O55176 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC15.69■□□□□ 0.1
Pja1O55176 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC15.69■□□□□ 0.1
Pja1O55176 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pja1O55176 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pja1O55176 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pja1O55176 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.69■□□□□ 0.1
Pja1O55176 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pja1O55176 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC15.69■□□□□ 0.1
Pja1O55176 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pja1O55176 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pja1O55176 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Pja1O55176 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pja1O55176 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pja1O55176 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pja1O55176 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pja1O55176 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pja1O55176 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Pja1O55176 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Pja1O55176 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pja1O55176 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pja1O55176 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pja1O55176 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pja1O55176 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Pja1O55176 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Pja1O55176 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pja1O55176 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Pja1O55176 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pja1O55176 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pja1O55176 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Pja1O55176 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pja1O55176 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pja1O55176 Gm25990-201ENSMUST00000102440 86 ntBASIC15.68■□□□□ 0.1
Pja1O55176 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pja1O55176 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pja1O55176 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pja1O55176 AC158538.1-201ENSMUST00000225870 294 ntBASIC15.68■□□□□ 0.1
Pja1O55176 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pja1O55176 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pja1O55176 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Pja1O55176 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pja1O55176 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pja1O55176 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pja1O55176 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pja1O55176 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pja1O55176 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Pja1O55176 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pja1O55176 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Pja1O55176 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pja1O55176 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Pja1O55176 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pja1O55176 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
Pja1O55176 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pja1O55176 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Pja1O55176 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pja1O55176 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pja1O55176 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pja1O55176 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pja1O55176 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pja1O55176 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pja1O55176 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Pja1O55176 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pja1O55176 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.67■□□□□ 0.1
Pja1O55176 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pja1O55176 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pja1O55176 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15.67■□□□□ 0.1
Pja1O55176 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pja1O55176 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pja1O55176 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Pja1O55176 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.67■□□□□ 0.1
Pja1O55176 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pja1O55176 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pja1O55176 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pja1O55176 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
Pja1O55176 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pja1O55176 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pja1O55176 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pja1O55176 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pja1O55176 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pja1O55176 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pja1O55176 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pja1O55176 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pja1O55176 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pja1O55176 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pja1O55176 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pja1O55176 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Pja1O55176 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Pja1O55176 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pja1O55176 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.66■□□□□ 0.1
Pja1O55176 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.66■□□□□ 0.1
Pja1O55176 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC15.66■□□□□ 0.1
Pja1O55176 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms