Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Pde6dO55057 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Pde6dO55057 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Pde6dO55057 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Pde6dO55057 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pde6dO55057 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pde6dO55057 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC11.73□□□□□ -0.53
Pde6dO55057 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pde6dO55057 Ntrk2-208ENSMUST00000225583 2719 ntBASIC11.73□□□□□ -0.53
Pde6dO55057 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pde6dO55057 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pde6dO55057 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pde6dO55057 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pde6dO55057 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pde6dO55057 Gm21009-201ENSMUST00000197169 1669 ntBASIC11.72□□□□□ -0.53
Pde6dO55057 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pde6dO55057 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pde6dO55057 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Pde6dO55057 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pde6dO55057 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pde6dO55057 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Pde6dO55057 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC11.72□□□□□ -0.53
Pde6dO55057 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pde6dO55057 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pde6dO55057 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC11.72□□□□□ -0.53
Pde6dO55057 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pde6dO55057 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pde6dO55057 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pde6dO55057 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pde6dO55057 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Pde6dO55057 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pde6dO55057 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pde6dO55057 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
Pde6dO55057 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC11.72□□□□□ -0.53
Pde6dO55057 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC11.72□□□□□ -0.53
Pde6dO55057 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pde6dO55057 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pde6dO55057 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pde6dO55057 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pde6dO55057 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pde6dO55057 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pde6dO55057 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC11.71□□□□□ -0.53
Pde6dO55057 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC11.71□□□□□ -0.53
Pde6dO55057 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pde6dO55057 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pde6dO55057 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pde6dO55057 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Pde6dO55057 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pde6dO55057 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pde6dO55057 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pde6dO55057 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pde6dO55057 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pde6dO55057 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pde6dO55057 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pde6dO55057 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pde6dO55057 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pde6dO55057 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pde6dO55057 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Pde6dO55057 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Pde6dO55057 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pde6dO55057 Gm7286-201ENSMUST00000182691 1007 ntBASIC11.71□□□□□ -0.53
Pde6dO55057 AC154649.1-201ENSMUST00000227392 384 ntBASIC11.71□□□□□ -0.53
Pde6dO55057 Gm9987-201ENSMUST00000069768 567 ntBASIC11.71□□□□□ -0.53
Pde6dO55057 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pde6dO55057 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pde6dO55057 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Pde6dO55057 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pde6dO55057 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC11.71□□□□□ -0.53
Pde6dO55057 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pde6dO55057 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC11.71□□□□□ -0.53
Pde6dO55057 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pde6dO55057 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC11.71□□□□□ -0.54
Pde6dO55057 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Pde6dO55057 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Pde6dO55057 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pde6dO55057 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pde6dO55057 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.54
Pde6dO55057 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pde6dO55057 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC11.71□□□□□ -0.54
Pde6dO55057 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Pde6dO55057 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pde6dO55057 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pde6dO55057 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pde6dO55057 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pde6dO55057 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.7□□□□□ -0.54
Pde6dO55057 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pde6dO55057 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
Pde6dO55057 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pde6dO55057 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pde6dO55057 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pde6dO55057 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pde6dO55057 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pde6dO55057 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pde6dO55057 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pde6dO55057 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Pde6dO55057 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pde6dO55057 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Pde6dO55057 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pde6dO55057 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pde6dO55057 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms