Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
SncaO55042 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SncaO55042 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.32□□□□□ -0.44
SncaO55042 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SncaO55042 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SncaO55042 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
SncaO55042 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
SncaO55042 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SncaO55042 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SncaO55042 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.32□□□□□ -0.44
SncaO55042 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SncaO55042 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SncaO55042 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SncaO55042 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SncaO55042 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
SncaO55042 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
SncaO55042 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
SncaO55042 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC12.32□□□□□ -0.44
SncaO55042 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC12.32□□□□□ -0.44
SncaO55042 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SncaO55042 Gm27357-201ENSMUST00000183754 135 ntBASIC12.32□□□□□ -0.44
SncaO55042 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
SncaO55042 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC12.32□□□□□ -0.44
SncaO55042 AC154471.1-201ENSMUST00000224418 436 ntBASIC12.32□□□□□ -0.44
SncaO55042 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
SncaO55042 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SncaO55042 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SncaO55042 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SncaO55042 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SncaO55042 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SncaO55042 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SncaO55042 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.32□□□□□ -0.44
SncaO55042 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.32□□□□□ -0.44
SncaO55042 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SncaO55042 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SncaO55042 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SncaO55042 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
SncaO55042 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SncaO55042 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
SncaO55042 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SncaO55042 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SncaO55042 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SncaO55042 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SncaO55042 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SncaO55042 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SncaO55042 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SncaO55042 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SncaO55042 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SncaO55042 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SncaO55042 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.31□□□□□ -0.44
SncaO55042 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC12.31□□□□□ -0.44
SncaO55042 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SncaO55042 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SncaO55042 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC12.31□□□□□ -0.44
SncaO55042 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SncaO55042 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SncaO55042 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SncaO55042 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
SncaO55042 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
SncaO55042 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.31□□□□□ -0.44
SncaO55042 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SncaO55042 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SncaO55042 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SncaO55042 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
SncaO55042 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
SncaO55042 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SncaO55042 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
SncaO55042 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SncaO55042 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SncaO55042 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.31□□□□□ -0.44
SncaO55042 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SncaO55042 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SncaO55042 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SncaO55042 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SncaO55042 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
SncaO55042 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SncaO55042 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SncaO55042 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SncaO55042 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC12.3□□□□□ -0.44
SncaO55042 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SncaO55042 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SncaO55042 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SncaO55042 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SncaO55042 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC12.3□□□□□ -0.44
SncaO55042 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SncaO55042 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
SncaO55042 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SncaO55042 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SncaO55042 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SncaO55042 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SncaO55042 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SncaO55042 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SncaO55042 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SncaO55042 Gm14780-201ENSMUST00000118387 2737 ntBASIC12.3□□□□□ -0.44
SncaO55042 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SncaO55042 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SncaO55042 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.3□□□□□ -0.44
SncaO55042 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SncaO55042 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SncaO55042 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms