Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcl13O55038 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcl13O55038 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcl13O55038 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcl13O55038 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcl13O55038 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcl13O55038 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcl13O55038 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcl13O55038 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcl13O55038 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcl13O55038 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcl13O55038 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcl13O55038 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcl13O55038 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcl13O55038 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcl13O55038 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcl13O55038 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC12.54□□□□□ -0.4
Cxcl13O55038 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcl13O55038 Tfap2a-203ENSMUST00000223869 2037 ntBASIC12.54□□□□□ -0.4
Cxcl13O55038 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcl13O55038 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcl13O55038 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Cxcl13O55038 Gm13464-201ENSMUST00000119418 935 ntBASIC12.54□□□□□ -0.4
Cxcl13O55038 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcl13O55038 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcl13O55038 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.54□□□□□ -0.4
Cxcl13O55038 AC158529.1-201ENSMUST00000223618 239 ntBASIC12.54□□□□□ -0.4
Cxcl13O55038 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcl13O55038 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Cxcl13O55038 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Cxcl13O55038 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcl13O55038 Gm42466-201ENSMUST00000202099 1301 ntBASIC12.54□□□□□ -0.4
Cxcl13O55038 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Cxcl13O55038 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Cxcl13O55038 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcl13O55038 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcl13O55038 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcl13O55038 Gm16011-201ENSMUST00000121567 2662 ntBASIC12.54□□□□□ -0.4
Cxcl13O55038 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cxcl13O55038 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Cxcl13O55038 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Cxcl13O55038 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl13O55038 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Cxcl13O55038 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl13O55038 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl13O55038 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl13O55038 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl13O55038 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl13O55038 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl13O55038 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl13O55038 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl13O55038 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cxcl13O55038 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl13O55038 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl13O55038 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl13O55038 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Cxcl13O55038 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl13O55038 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl13O55038 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl13O55038 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC12.53□□□□□ -0.4
Cxcl13O55038 Gm6756-201ENSMUST00000180647 1620 ntBASIC12.53□□□□□ -0.4
Cxcl13O55038 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl13O55038 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.53□□□□□ -0.4
Cxcl13O55038 Trav13-3-201ENSMUST00000117226 336 ntBASIC12.53□□□□□ -0.4
Cxcl13O55038 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl13O55038 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl13O55038 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl13O55038 Gm29541-201ENSMUST00000191351 678 ntBASIC12.53□□□□□ -0.4
Cxcl13O55038 Gm37277-201ENSMUST00000194052 1111 ntBASIC12.53□□□□□ -0.4
Cxcl13O55038 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl13O55038 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl13O55038 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl13O55038 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl13O55038 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.53□□□□□ -0.4
Cxcl13O55038 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl13O55038 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl13O55038 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl13O55038 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl13O55038 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl13O55038 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cxcl13O55038 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.53□□□□□ -0.4
Cxcl13O55038 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cxcl13O55038 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cxcl13O55038 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cxcl13O55038 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cxcl13O55038 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cxcl13O55038 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cxcl13O55038 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cxcl13O55038 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cxcl13O55038 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cxcl13O55038 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cxcl13O55038 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cxcl13O55038 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cxcl13O55038 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.52□□□□□ -0.41
Cxcl13O55038 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.52□□□□□ -0.41
Cxcl13O55038 Gm6539-201ENSMUST00000119157 1064 ntBASIC12.52□□□□□ -0.41
Cxcl13O55038 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12.52□□□□□ -0.41
Cxcl13O55038 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cxcl13O55038 Gm27618-201ENSMUST00000183671 60 ntBASIC12.52□□□□□ -0.41
Cxcl13O55038 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms