Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
BckdkO55028 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
BckdkO55028 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13.8□□□□□ -0.2
BckdkO55028 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
BckdkO55028 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.8□□□□□ -0.2
BckdkO55028 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
BckdkO55028 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
BckdkO55028 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
BckdkO55028 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
BckdkO55028 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
BckdkO55028 Best4-ps-201ENSMUST00000129783 1380 ntBASIC13.8□□□□□ -0.2
BckdkO55028 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
BckdkO55028 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
BckdkO55028 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
BckdkO55028 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
BckdkO55028 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
BckdkO55028 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
BckdkO55028 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
BckdkO55028 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
BckdkO55028 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.79□□□□□ -0.2
BckdkO55028 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
BckdkO55028 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
BckdkO55028 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
BckdkO55028 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
BckdkO55028 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
BckdkO55028 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
BckdkO55028 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
BckdkO55028 Gm23935-201ENSMUST00000102303 57 ntBASIC13.79□□□□□ -0.2
BckdkO55028 Gm24270-201ENSMUST00000102326 57 ntBASIC13.79□□□□□ -0.2
BckdkO55028 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.79□□□□□ -0.2
BckdkO55028 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
BckdkO55028 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
BckdkO55028 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
BckdkO55028 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
BckdkO55028 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
BckdkO55028 Gm24245-201ENSMUST00000157318 57 ntBASIC13.79□□□□□ -0.2
BckdkO55028 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC13.79□□□□□ -0.2
BckdkO55028 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.79□□□□□ -0.2
BckdkO55028 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
BckdkO55028 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
BckdkO55028 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
BckdkO55028 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
BckdkO55028 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
BckdkO55028 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
BckdkO55028 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
BckdkO55028 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
BckdkO55028 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
BckdkO55028 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
BckdkO55028 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC13.79□□□□□ -0.2
BckdkO55028 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
BckdkO55028 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
BckdkO55028 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
BckdkO55028 Prkcz2-201ENSMUST00000206136 1756 ntBASIC13.78□□□□□ -0.2
BckdkO55028 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
BckdkO55028 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC13.78□□□□□ -0.2
BckdkO55028 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
BckdkO55028 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
BckdkO55028 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
BckdkO55028 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
BckdkO55028 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
BckdkO55028 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
BckdkO55028 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
BckdkO55028 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
BckdkO55028 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
BckdkO55028 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
BckdkO55028 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
BckdkO55028 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC13.78□□□□□ -0.2
BckdkO55028 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.78□□□□□ -0.2
BckdkO55028 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
BckdkO55028 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC13.78□□□□□ -0.2
BckdkO55028 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
BckdkO55028 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
BckdkO55028 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
BckdkO55028 Gm5366-201ENSMUST00000215494 1338 ntBASIC13.78□□□□□ -0.2
BckdkO55028 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
BckdkO55028 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
BckdkO55028 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
BckdkO55028 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
BckdkO55028 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
BckdkO55028 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
BckdkO55028 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
BckdkO55028 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
BckdkO55028 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
BckdkO55028 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
BckdkO55028 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
BckdkO55028 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.78□□□□□ -0.2
BckdkO55028 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
BckdkO55028 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
BckdkO55028 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
BckdkO55028 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.2
BckdkO55028 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
BckdkO55028 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
BckdkO55028 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
BckdkO55028 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
BckdkO55028 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
BckdkO55028 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
BckdkO55028 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
BckdkO55028 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
BckdkO55028 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
BckdkO55028 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms