Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1bO55017 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1bO55017 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cacna1bO55017 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Cacna1bO55017 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC14.3□□□□□ -0.12
Cacna1bO55017 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Cacna1bO55017 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cacna1bO55017 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.3□□□□□ -0.12
Cacna1bO55017 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC14.3□□□□□ -0.12
Cacna1bO55017 Gm45195-201ENSMUST00000205597 1008 ntBASIC14.3□□□□□ -0.12
Cacna1bO55017 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cacna1bO55017 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cacna1bO55017 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cacna1bO55017 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Cacna1bO55017 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cacna1bO55017 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cacna1bO55017 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cacna1bO55017 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cacna1bO55017 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cacna1bO55017 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Cacna1bO55017 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cacna1bO55017 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC14.3□□□□□ -0.12
Cacna1bO55017 Gm15824-201ENSMUST00000119516 955 ntBASIC14.3□□□□□ -0.12
Cacna1bO55017 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC14.3□□□□□ -0.12
Cacna1bO55017 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Cacna1bO55017 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC14.3□□□□□ -0.12
Cacna1bO55017 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC14.3□□□□□ -0.12
Cacna1bO55017 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cacna1bO55017 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Cacna1bO55017 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cacna1bO55017 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cacna1bO55017 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cacna1bO55017 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cacna1bO55017 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cacna1bO55017 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cacna1bO55017 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cacna1bO55017 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cacna1bO55017 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cacna1bO55017 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cacna1bO55017 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cacna1bO55017 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cacna1bO55017 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.29□□□□□ -0.12
Cacna1bO55017 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.29□□□□□ -0.12
Cacna1bO55017 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.29□□□□□ -0.12
Cacna1bO55017 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.29□□□□□ -0.12
Cacna1bO55017 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cacna1bO55017 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cacna1bO55017 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cacna1bO55017 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cacna1bO55017 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Cacna1bO55017 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cacna1bO55017 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cacna1bO55017 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cacna1bO55017 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cacna1bO55017 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cacna1bO55017 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cacna1bO55017 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Cacna1bO55017 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cacna1bO55017 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cacna1bO55017 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cacna1bO55017 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.29□□□□□ -0.12
Cacna1bO55017 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.29□□□□□ -0.12
Cacna1bO55017 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Cacna1bO55017 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cacna1bO55017 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cacna1bO55017 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.28□□□□□ -0.12
Cacna1bO55017 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Cacna1bO55017 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cacna1bO55017 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cacna1bO55017 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cacna1bO55017 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Cacna1bO55017 Gm17150-201ENSMUST00000165577 381 ntBASIC14.28□□□□□ -0.12
Cacna1bO55017 Gm28760-201ENSMUST00000185995 736 ntBASIC14.28□□□□□ -0.12
Cacna1bO55017 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC14.28□□□□□ -0.12
Cacna1bO55017 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cacna1bO55017 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Cacna1bO55017 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cacna1bO55017 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Cacna1bO55017 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Cacna1bO55017 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cacna1bO55017 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cacna1bO55017 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cacna1bO55017 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.28□□□□□ -0.12
Cacna1bO55017 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cacna1bO55017 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cacna1bO55017 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.28□□□□□ -0.12
Cacna1bO55017 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cacna1bO55017 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cacna1bO55017 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cacna1bO55017 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Cacna1bO55017 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cacna1bO55017 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Cacna1bO55017 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Cacna1bO55017 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC14.27□□□□□ -0.12
Cacna1bO55017 Mir1247-201ENSMUST00000116706 82 ntBASIC14.27□□□□□ -0.12
Cacna1bO55017 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cacna1bO55017 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cacna1bO55017 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Cacna1bO55017 Gm29310-201ENSMUST00000185468 696 ntBASIC14.27□□□□□ -0.12
Cacna1bO55017 Gm21825-201ENSMUST00000185728 696 ntBASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms