Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Nr1i3O35627 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC15.97■□□□□ 0.15
Nr1i3O35627 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Nr1i3O35627 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nr1i3O35627 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nr1i3O35627 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC15.96■□□□□ 0.15
Nr1i3O35627 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Nr1i3O35627 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nr1i3O35627 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nr1i3O35627 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nr1i3O35627 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Nr1i3O35627 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC15.96■□□□□ 0.15
Nr1i3O35627 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC15.96■□□□□ 0.15
Nr1i3O35627 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC15.96■□□□□ 0.15
Nr1i3O35627 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nr1i3O35627 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nr1i3O35627 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nr1i3O35627 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nr1i3O35627 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nr1i3O35627 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Nr1i3O35627 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nr1i3O35627 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Nr1i3O35627 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Nr1i3O35627 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.14
Nr1i3O35627 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Nr1i3O35627 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Nr1i3O35627 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nr1i3O35627 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nr1i3O35627 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Nr1i3O35627 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Nr1i3O35627 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC15.95■□□□□ 0.14
Nr1i3O35627 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nr1i3O35627 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nr1i3O35627 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nr1i3O35627 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nr1i3O35627 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nr1i3O35627 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nr1i3O35627 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nr1i3O35627 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nr1i3O35627 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Nr1i3O35627 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nr1i3O35627 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC15.95■□□□□ 0.14
Nr1i3O35627 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC15.95■□□□□ 0.14
Nr1i3O35627 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Nr1i3O35627 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Nr1i3O35627 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC15.95■□□□□ 0.14
Nr1i3O35627 Gm10459-201ENSMUST00000202708 1155 ntBASIC15.95■□□□□ 0.14
Nr1i3O35627 AC161829.1-201ENSMUST00000220298 281 ntBASIC15.95■□□□□ 0.14
Nr1i3O35627 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nr1i3O35627 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nr1i3O35627 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Nr1i3O35627 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC15.95■□□□□ 0.14
Nr1i3O35627 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nr1i3O35627 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nr1i3O35627 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC15.95■□□□□ 0.14
Nr1i3O35627 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nr1i3O35627 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Nr1i3O35627 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Nr1i3O35627 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nr1i3O35627 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nr1i3O35627 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Nr1i3O35627 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nr1i3O35627 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nr1i3O35627 Gm14451-201ENSMUST00000121581 1542 ntBASIC15.94■□□□□ 0.14
Nr1i3O35627 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Nr1i3O35627 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nr1i3O35627 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nr1i3O35627 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nr1i3O35627 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Nr1i3O35627 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC15.94■□□□□ 0.14
Nr1i3O35627 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nr1i3O35627 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nr1i3O35627 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC15.94■□□□□ 0.14
Nr1i3O35627 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC15.94■□□□□ 0.14
Nr1i3O35627 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Nr1i3O35627 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Nr1i3O35627 Gm17971-201ENSMUST00000190239 806 ntBASIC15.94■□□□□ 0.14
Nr1i3O35627 Gm42670-201ENSMUST00000201816 1292 ntBASIC15.94■□□□□ 0.14
Nr1i3O35627 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nr1i3O35627 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nr1i3O35627 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nr1i3O35627 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nr1i3O35627 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Nr1i3O35627 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nr1i3O35627 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nr1i3O35627 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nr1i3O35627 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nr1i3O35627 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nr1i3O35627 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Nr1i3O35627 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nr1i3O35627 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nr1i3O35627 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nr1i3O35627 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nr1i3O35627 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nr1i3O35627 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.93■□□□□ 0.14
Nr1i3O35627 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.93■□□□□ 0.14
Nr1i3O35627 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nr1i3O35627 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nr1i3O35627 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
Nr1i3O35627 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms