Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Clcn6O35454 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Clcn6O35454 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Clcn6O35454 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Clcn6O35454 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Clcn6O35454 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clcn6O35454 Olfr710-201ENSMUST00000055923 1312 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Clcn6O35454 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Clcn6O35454 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC16.21■□□□□ 0.19
Clcn6O35454 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clcn6O35454 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Clcn6O35454 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clcn6O35454 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clcn6O35454 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Clcn6O35454 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clcn6O35454 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clcn6O35454 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Clcn6O35454 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clcn6O35454 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clcn6O35454 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clcn6O35454 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.21■□□□□ 0.19
Clcn6O35454 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.21■□□□□ 0.19
Clcn6O35454 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Clcn6O35454 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.21■□□□□ 0.19
Clcn6O35454 Gm38000-201ENSMUST00000192390 1215 ntBASIC16.21■□□□□ 0.19
Clcn6O35454 Gm42454-201ENSMUST00000196805 1181 ntBASIC16.21■□□□□ 0.19
Clcn6O35454 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Clcn6O35454 AC158392.1-201ENSMUST00000223720 1069 ntBASIC16.21■□□□□ 0.19
Clcn6O35454 Vmn1r39-202ENSMUST00000226783 918 ntAPPRIS P2 BASIC16.21■□□□□ 0.19
Clcn6O35454 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Clcn6O35454 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clcn6O35454 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Clcn6O35454 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clcn6O35454 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clcn6O35454 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clcn6O35454 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Clcn6O35454 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clcn6O35454 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Clcn6O35454 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Clcn6O35454 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Clcn6O35454 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Clcn6O35454 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
Clcn6O35454 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Clcn6O35454 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Clcn6O35454 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clcn6O35454 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clcn6O35454 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clcn6O35454 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clcn6O35454 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clcn6O35454 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clcn6O35454 Gm42905-201ENSMUST00000196237 1611 ntBASIC16.2■□□□□ 0.18
Clcn6O35454 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clcn6O35454 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Clcn6O35454 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clcn6O35454 Gm7284-201ENSMUST00000131667 944 ntBASIC16.2■□□□□ 0.18
Clcn6O35454 Csn3-201ENSMUST00000001667 991 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clcn6O35454 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC16.2■□□□□ 0.18
Clcn6O35454 Gm19214-201ENSMUST00000191956 1083 ntBASIC16.2■□□□□ 0.18
Clcn6O35454 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clcn6O35454 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Clcn6O35454 AC166902.2-201ENSMUST00000215193 837 ntTSL 5 BASIC16.2■□□□□ 0.18
Clcn6O35454 Gm19169-201ENSMUST00000220109 1246 ntBASIC16.2■□□□□ 0.18
Clcn6O35454 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clcn6O35454 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clcn6O35454 Olfr1161-201ENSMUST00000054845 1012 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Clcn6O35454 Olfr898-201ENSMUST00000076504 951 ntAPPRIS P2 BASIC16.2■□□□□ 0.18
Clcn6O35454 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clcn6O35454 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Clcn6O35454 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clcn6O35454 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Clcn6O35454 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Clcn6O35454 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clcn6O35454 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clcn6O35454 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clcn6O35454 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clcn6O35454 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clcn6O35454 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clcn6O35454 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clcn6O35454 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clcn6O35454 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clcn6O35454 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clcn6O35454 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clcn6O35454 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Clcn6O35454 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clcn6O35454 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clcn6O35454 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clcn6O35454 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clcn6O35454 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clcn6O35454 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Clcn6O35454 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clcn6O35454 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Clcn6O35454 Pdlim5-204ENSMUST00000168967 1755 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Clcn6O35454 Tmem156-201ENSMUST00000043352 1565 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Clcn6O35454 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Clcn6O35454 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC16.19■□□□□ 0.18
Clcn6O35454 Gm16420-201ENSMUST00000120258 856 ntBASIC16.19■□□□□ 0.18
Clcn6O35454 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.19■□□□□ 0.18
Clcn6O35454 Gm23776-201ENSMUST00000158993 325 ntBASIC16.19■□□□□ 0.18
Clcn6O35454 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Clcn6O35454 Gm29518-201ENSMUST00000190858 372 ntBASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms