Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Mir770-201ENSMUST00000103252 94 ntBASIC11.61□□□□□ -0.55
Tnfsf11O35235 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfsf11O35235 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC11.61□□□□□ -0.55
Tnfsf11O35235 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC11.61□□□□□ -0.55
Tnfsf11O35235 Gm8349-201ENSMUST00000182720 1003 ntBASIC11.61□□□□□ -0.55
Tnfsf11O35235 Krtap5-1-202ENSMUST00000188274 742 ntBASIC11.61□□□□□ -0.55
Tnfsf11O35235 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfsf11O35235 Gm10252-201ENSMUST00000209541 832 ntBASIC11.61□□□□□ -0.55
Tnfsf11O35235 Gm19164-201ENSMUST00000210667 640 ntBASIC11.61□□□□□ -0.55
Tnfsf11O35235 Gm18032-201ENSMUST00000222541 538 ntBASIC11.61□□□□□ -0.55
Tnfsf11O35235 AC159093.1-201ENSMUST00000227779 380 ntBASIC11.61□□□□□ -0.55
Tnfsf11O35235 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfsf11O35235 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfsf11O35235 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfsf11O35235 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfsf11O35235 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Tnfsf11O35235 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfsf11O35235 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Tnfsf11O35235 Gm26513-201ENSMUST00000181802 2489 ntBASIC11.61□□□□□ -0.55
Tnfsf11O35235 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Tnfsf11O35235 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Tnfsf11O35235 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC11.61□□□□□ -0.55
Tnfsf11O35235 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfsf11O35235 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfsf11O35235 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfsf11O35235 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfsf11O35235 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Tnfsf11O35235 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfsf11O35235 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Tnfsf11O35235 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfsf11O35235 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfsf11O35235 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfsf11O35235 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfsf11O35235 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfsf11O35235 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfsf11O35235 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfsf11O35235 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC11.6□□□□□ -0.55
Tnfsf11O35235 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfsf11O35235 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfsf11O35235 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfsf11O35235 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Tnfsf11O35235 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC11.6□□□□□ -0.55
Tnfsf11O35235 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Tnfsf11O35235 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfsf11O35235 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Tnfsf11O35235 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Tnfsf11O35235 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC11.6□□□□□ -0.55
Tnfsf11O35235 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC11.6□□□□□ -0.55
Tnfsf11O35235 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC11.6□□□□□ -0.55
Tnfsf11O35235 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfsf11O35235 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfsf11O35235 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfsf11O35235 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfsf11O35235 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfsf11O35235 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfsf11O35235 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfsf11O35235 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfsf11O35235 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfsf11O35235 Gm38197-201ENSMUST00000192320 2122 ntBASIC11.6□□□□□ -0.55
Tnfsf11O35235 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfsf11O35235 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfsf11O35235 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfsf11O35235 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfsf11O35235 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfsf11O35235 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfsf11O35235 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfsf11O35235 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfsf11O35235 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfsf11O35235 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfsf11O35235 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfsf11O35235 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Tnfsf11O35235 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfsf11O35235 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Tnfsf11O35235 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfsf11O35235 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfsf11O35235 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfsf11O35235 Gm43056-201ENSMUST00000197865 2791 ntBASIC11.59□□□□□ -0.55
Tnfsf11O35235 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfsf11O35235 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfsf11O35235 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfsf11O35235 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfsf11O35235 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC11.59□□□□□ -0.55
Tnfsf11O35235 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC11.59□□□□□ -0.55
Tnfsf11O35235 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfsf11O35235 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfsf11O35235 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfsf11O35235 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfsf11O35235 Gm7286-201ENSMUST00000182691 1007 ntBASIC11.59□□□□□ -0.55
Tnfsf11O35235 Mir6982-201ENSMUST00000184354 68 ntBASIC11.59□□□□□ -0.55
Tnfsf11O35235 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC11.59□□□□□ -0.55
Tnfsf11O35235 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfsf11O35235 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfsf11O35235 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfsf11O35235 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfsf11O35235 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfsf11O35235 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfsf11O35235 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfsf11O35235 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfsf11O35235 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tnfsf11O35235 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms