Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 AC162801.1-201ENSMUST00000220612 198 ntBASIC18.87■□□□□ 0.61
Col15a1O35206 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col15a1O35206 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col15a1O35206 Gm10275-201ENSMUST00000092620 635 ntBASIC18.87■□□□□ 0.61
Col15a1O35206 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col15a1O35206 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col15a1O35206 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col15a1O35206 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Col15a1O35206 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Col15a1O35206 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col15a1O35206 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col15a1O35206 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC18.87■□□□□ 0.61
Col15a1O35206 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col15a1O35206 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col15a1O35206 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col15a1O35206 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col15a1O35206 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col15a1O35206 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col15a1O35206 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC18.86■□□□□ 0.61
Col15a1O35206 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC18.86■□□□□ 0.61
Col15a1O35206 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC18.86■□□□□ 0.61
Col15a1O35206 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Col15a1O35206 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Col15a1O35206 Mir6392-201ENSMUST00000184924 108 ntBASIC18.86■□□□□ 0.61
Col15a1O35206 Gm44719-201ENSMUST00000206404 149 ntBASIC18.86■□□□□ 0.61
Col15a1O35206 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col15a1O35206 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col15a1O35206 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col15a1O35206 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Col15a1O35206 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col15a1O35206 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col15a1O35206 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col15a1O35206 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Col15a1O35206 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Col15a1O35206 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC18.86■□□□□ 0.61
Col15a1O35206 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col15a1O35206 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col15a1O35206 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col15a1O35206 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Col15a1O35206 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col15a1O35206 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Col15a1O35206 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC18.85■□□□□ 0.61
Col15a1O35206 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Col15a1O35206 Gm12585-201ENSMUST00000117307 290 ntBASIC18.85■□□□□ 0.61
Col15a1O35206 Gm15678-201ENSMUST00000117573 960 ntBASIC18.85■□□□□ 0.61
Col15a1O35206 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC18.85■□□□□ 0.61
Col15a1O35206 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Col15a1O35206 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC18.85■□□□□ 0.61
Col15a1O35206 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col15a1O35206 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC18.85■□□□□ 0.61
Col15a1O35206 AC165157.4-201ENSMUST00000220587 139 ntBASIC18.85■□□□□ 0.61
Col15a1O35206 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC18.85■□□□□ 0.61
Col15a1O35206 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col15a1O35206 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Col15a1O35206 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Col15a1O35206 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col15a1O35206 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col15a1O35206 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col15a1O35206 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col15a1O35206 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col15a1O35206 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col15a1O35206 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
Col15a1O35206 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Col15a1O35206 Gm15460-201ENSMUST00000118147 391 ntBASIC18.84■□□□□ 0.61
Col15a1O35206 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col15a1O35206 Gm13829-201ENSMUST00000119600 138 ntBASIC18.84■□□□□ 0.61
Col15a1O35206 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Col15a1O35206 Gm33320-201ENSMUST00000192232 530 ntBASIC18.84■□□□□ 0.61
Col15a1O35206 AC125350.2-201ENSMUST00000224737 727 ntBASIC18.84■□□□□ 0.61
Col15a1O35206 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC18.84■□□□□ 0.61
Col15a1O35206 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col15a1O35206 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC18.84■□□□□ 0.61
Col15a1O35206 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col15a1O35206 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Col15a1O35206 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col15a1O35206 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col15a1O35206 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col15a1O35206 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col15a1O35206 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC18.84■□□□□ 0.61
Col15a1O35206 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col15a1O35206 Gm42901-201ENSMUST00000197735 3171 ntBASIC18.84■□□□□ 0.61
Col15a1O35206 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col15a1O35206 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Col15a1O35206 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Col15a1O35206 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col15a1O35206 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col15a1O35206 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
Col15a1O35206 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col15a1O35206 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col15a1O35206 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Col15a1O35206 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Col15a1O35206 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Col15a1O35206 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Col15a1O35206 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
Col15a1O35206 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC18.83■□□□□ 0.61
Col15a1O35206 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Col15a1O35206 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Col15a1O35206 Gm11918-201ENSMUST00000121660 179 ntBASIC18.83■□□□□ 0.61
Col15a1O35206 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC18.83■□□□□ 0.61
Col15a1O35206 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms