Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cx3cl1O35188 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cx3cl1O35188 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cx3cl1O35188 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cx3cl1O35188 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cx3cl1O35188 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cx3cl1O35188 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cx3cl1O35188 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cx3cl1O35188 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cx3cl1O35188 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cx3cl1O35188 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cx3cl1O35188 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Cx3cl1O35188 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cx3cl1O35188 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.97□□□□□ -0.17
Cx3cl1O35188 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cx3cl1O35188 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cx3cl1O35188 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cx3cl1O35188 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cx3cl1O35188 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.97□□□□□ -0.17
Cx3cl1O35188 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC13.97□□□□□ -0.17
Cx3cl1O35188 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cx3cl1O35188 Gm45747-201ENSMUST00000212203 999 ntBASIC13.97□□□□□ -0.17
Cx3cl1O35188 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cx3cl1O35188 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cx3cl1O35188 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cx3cl1O35188 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cx3cl1O35188 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Cx3cl1O35188 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cx3cl1O35188 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cx3cl1O35188 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.97□□□□□ -0.17
Cx3cl1O35188 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cx3cl1O35188 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cx3cl1O35188 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cx3cl1O35188 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cx3cl1O35188 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cx3cl1O35188 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cx3cl1O35188 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.96□□□□□ -0.17
Cx3cl1O35188 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cx3cl1O35188 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Cx3cl1O35188 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cx3cl1O35188 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cx3cl1O35188 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cx3cl1O35188 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
Cx3cl1O35188 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cx3cl1O35188 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cx3cl1O35188 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cx3cl1O35188 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.96□□□□□ -0.17
Cx3cl1O35188 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cx3cl1O35188 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cx3cl1O35188 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC13.96□□□□□ -0.17
Cx3cl1O35188 Gm17271-201ENSMUST00000165535 355 ntBASIC13.96□□□□□ -0.17
Cx3cl1O35188 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cx3cl1O35188 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Cx3cl1O35188 Gm27301-201ENSMUST00000184012 127 ntBASIC13.96□□□□□ -0.17
Cx3cl1O35188 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.96□□□□□ -0.17
Cx3cl1O35188 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC13.96□□□□□ -0.17
Cx3cl1O35188 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.96□□□□□ -0.17
Cx3cl1O35188 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cx3cl1O35188 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cx3cl1O35188 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cx3cl1O35188 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Cx3cl1O35188 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cx3cl1O35188 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
Cx3cl1O35188 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.96□□□□□ -0.17
Cx3cl1O35188 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cx3cl1O35188 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC13.96□□□□□ -0.18
Cx3cl1O35188 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.96□□□□□ -0.18
Cx3cl1O35188 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cx3cl1O35188 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC13.96□□□□□ -0.18
Cx3cl1O35188 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
Cx3cl1O35188 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cx3cl1O35188 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cx3cl1O35188 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cx3cl1O35188 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cx3cl1O35188 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cx3cl1O35188 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cx3cl1O35188 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13.95□□□□□ -0.18
Cx3cl1O35188 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC13.95□□□□□ -0.18
Cx3cl1O35188 Gm43767-201ENSMUST00000198933 381 ntBASIC13.95□□□□□ -0.18
Cx3cl1O35188 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cx3cl1O35188 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cx3cl1O35188 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cx3cl1O35188 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cx3cl1O35188 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cx3cl1O35188 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cx3cl1O35188 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Cx3cl1O35188 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cx3cl1O35188 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cx3cl1O35188 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cx3cl1O35188 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cx3cl1O35188 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cx3cl1O35188 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cx3cl1O35188 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
Cx3cl1O35188 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cx3cl1O35188 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.94□□□□□ -0.18
Cx3cl1O35188 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cx3cl1O35188 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cx3cl1O35188 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cx3cl1O35188 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cx3cl1O35188 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms