Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Alx4O35137 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
Alx4O35137 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Alx4O35137 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Alx4O35137 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Alx4O35137 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Alx4O35137 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Alx4O35137 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.25□□□□□ -0.29
Alx4O35137 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Alx4O35137 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Alx4O35137 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Alx4O35137 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.25□□□□□ -0.29
Alx4O35137 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.25□□□□□ -0.29
Alx4O35137 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Alx4O35137 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
Alx4O35137 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Alx4O35137 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Alx4O35137 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Alx4O35137 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Alx4O35137 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Alx4O35137 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Alx4O35137 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
Alx4O35137 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Alx4O35137 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
Alx4O35137 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Alx4O35137 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Alx4O35137 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Alx4O35137 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Alx4O35137 Gm12895-201ENSMUST00000122214 226 ntBASIC13.25□□□□□ -0.29
Alx4O35137 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Alx4O35137 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
Alx4O35137 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Alx4O35137 Gm27357-201ENSMUST00000183754 135 ntBASIC13.25□□□□□ -0.29
Alx4O35137 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Alx4O35137 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Alx4O35137 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Alx4O35137 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Alx4O35137 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Alx4O35137 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Alx4O35137 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Alx4O35137 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Alx4O35137 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Alx4O35137 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Alx4O35137 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Alx4O35137 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Alx4O35137 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Alx4O35137 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Alx4O35137 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Alx4O35137 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Alx4O35137 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Alx4O35137 Gm5184-201ENSMUST00000220417 1702 ntBASIC13.25□□□□□ -0.29
Alx4O35137 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Alx4O35137 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Alx4O35137 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.24□□□□□ -0.29
Alx4O35137 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Alx4O35137 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Alx4O35137 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Alx4O35137 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Alx4O35137 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.24□□□□□ -0.29
Alx4O35137 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Alx4O35137 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Alx4O35137 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Alx4O35137 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Alx4O35137 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Alx4O35137 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Alx4O35137 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Alx4O35137 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Alx4O35137 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Alx4O35137 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Alx4O35137 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC13.24□□□□□ -0.29
Alx4O35137 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Alx4O35137 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Alx4O35137 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.24□□□□□ -0.29
Alx4O35137 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Alx4O35137 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC13.24□□□□□ -0.29
Alx4O35137 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Alx4O35137 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Alx4O35137 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Alx4O35137 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC13.24□□□□□ -0.29
Alx4O35137 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Alx4O35137 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Alx4O35137 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Alx4O35137 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Alx4O35137 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Alx4O35137 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Alx4O35137 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Alx4O35137 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Alx4O35137 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Alx4O35137 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Alx4O35137 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Alx4O35137 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Alx4O35137 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Alx4O35137 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Alx4O35137 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.23□□□□□ -0.29
Alx4O35137 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Alx4O35137 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Alx4O35137 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Alx4O35137 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Alx4O35137 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Alx4O35137 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms