Protein–RNA interactions for Protein: O09039

Sh2b3, SH2B adapter protein 3, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2b3O09039 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sh2b3O09039 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sh2b3O09039 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sh2b3O09039 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.22□□□□□ -0.29
Sh2b3O09039 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sh2b3O09039 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Sh2b3O09039 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sh2b3O09039 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Sh2b3O09039 Gm11453-201ENSMUST00000117318 1007 ntBASIC13.22□□□□□ -0.29
Sh2b3O09039 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC13.22□□□□□ -0.29
Sh2b3O09039 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.22□□□□□ -0.29
Sh2b3O09039 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sh2b3O09039 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sh2b3O09039 Gm7556-201ENSMUST00000201178 1084 ntBASIC13.22□□□□□ -0.29
Sh2b3O09039 Gm45747-201ENSMUST00000212203 999 ntBASIC13.22□□□□□ -0.29
Sh2b3O09039 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC13.22□□□□□ -0.29
Sh2b3O09039 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.22□□□□□ -0.29
Sh2b3O09039 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13.22□□□□□ -0.29
Sh2b3O09039 Gm18246-201ENSMUST00000221023 728 ntBASIC13.22□□□□□ -0.29
Sh2b3O09039 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sh2b3O09039 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sh2b3O09039 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sh2b3O09039 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC13.22□□□□□ -0.29
Sh2b3O09039 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sh2b3O09039 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC13.22□□□□□ -0.29
Sh2b3O09039 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
Sh2b3O09039 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sh2b3O09039 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sh2b3O09039 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sh2b3O09039 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sh2b3O09039 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sh2b3O09039 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sh2b3O09039 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sh2b3O09039 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sh2b3O09039 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.22□□□□□ -0.29
Sh2b3O09039 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Sh2b3O09039 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
Sh2b3O09039 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sh2b3O09039 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sh2b3O09039 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sh2b3O09039 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sh2b3O09039 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sh2b3O09039 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sh2b3O09039 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sh2b3O09039 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sh2b3O09039 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sh2b3O09039 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Sh2b3O09039 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.21□□□□□ -0.29
Sh2b3O09039 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC13.21□□□□□ -0.29
Sh2b3O09039 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.21□□□□□ -0.29
Sh2b3O09039 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Sh2b3O09039 AC155252.2-201ENSMUST00000226946 680 ntBASIC13.21□□□□□ -0.29
Sh2b3O09039 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
Sh2b3O09039 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sh2b3O09039 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sh2b3O09039 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sh2b3O09039 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sh2b3O09039 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sh2b3O09039 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Sh2b3O09039 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Sh2b3O09039 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Sh2b3O09039 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sh2b3O09039 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sh2b3O09039 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Sh2b3O09039 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sh2b3O09039 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.3
Sh2b3O09039 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sh2b3O09039 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sh2b3O09039 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Sh2b3O09039 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sh2b3O09039 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC13.2□□□□□ -0.3
Sh2b3O09039 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sh2b3O09039 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sh2b3O09039 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sh2b3O09039 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sh2b3O09039 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.2□□□□□ -0.3
Sh2b3O09039 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sh2b3O09039 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.2□□□□□ -0.3
Sh2b3O09039 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sh2b3O09039 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Sh2b3O09039 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sh2b3O09039 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.2□□□□□ -0.3
Sh2b3O09039 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.2□□□□□ -0.3
Sh2b3O09039 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Sh2b3O09039 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sh2b3O09039 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.2□□□□□ -0.3
Sh2b3O09039 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sh2b3O09039 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Sh2b3O09039 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sh2b3O09039 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Sh2b3O09039 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sh2b3O09039 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sh2b3O09039 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Sh2b3O09039 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sh2b3O09039 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC13.2□□□□□ -0.3
Sh2b3O09039 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sh2b3O09039 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Sh2b3O09039 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sh2b3O09039 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sh2b3O09039 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms