Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Shisa8J3QNX5 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Shisa8J3QNX5 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.57□□□□□ -0.24
Shisa8J3QNX5 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Shisa8J3QNX5 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Shisa8J3QNX5 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Shisa8J3QNX5 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Shisa8J3QNX5 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Shisa8J3QNX5 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Shisa8J3QNX5 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.57□□□□□ -0.24
Shisa8J3QNX5 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.57□□□□□ -0.24
Shisa8J3QNX5 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Shisa8J3QNX5 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Shisa8J3QNX5 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Shisa8J3QNX5 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Shisa8J3QNX5 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC13.57□□□□□ -0.24
Shisa8J3QNX5 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Shisa8J3QNX5 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Shisa8J3QNX5 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Shisa8J3QNX5 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Shisa8J3QNX5 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Shisa8J3QNX5 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Shisa8J3QNX5 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.57□□□□□ -0.24
Shisa8J3QNX5 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Shisa8J3QNX5 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Shisa8J3QNX5 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Shisa8J3QNX5 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Shisa8J3QNX5 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Shisa8J3QNX5 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Shisa8J3QNX5 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Shisa8J3QNX5 Acot6-202ENSMUST00000222921 3622 ntBASIC13.57□□□□□ -0.24
Shisa8J3QNX5 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Shisa8J3QNX5 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Shisa8J3QNX5 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Shisa8J3QNX5 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Shisa8J3QNX5 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Shisa8J3QNX5 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Shisa8J3QNX5 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Shisa8J3QNX5 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Shisa8J3QNX5 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Shisa8J3QNX5 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.56□□□□□ -0.24
Shisa8J3QNX5 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Shisa8J3QNX5 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.56□□□□□ -0.24
Shisa8J3QNX5 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Shisa8J3QNX5 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Shisa8J3QNX5 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Shisa8J3QNX5 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC13.56□□□□□ -0.24
Shisa8J3QNX5 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Shisa8J3QNX5 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC13.56□□□□□ -0.24
Shisa8J3QNX5 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Shisa8J3QNX5 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Shisa8J3QNX5 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Shisa8J3QNX5 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Shisa8J3QNX5 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.56□□□□□ -0.24
Shisa8J3QNX5 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Shisa8J3QNX5 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Shisa8J3QNX5 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Shisa8J3QNX5 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Shisa8J3QNX5 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Shisa8J3QNX5 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.56□□□□□ -0.24
Shisa8J3QNX5 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Shisa8J3QNX5 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Shisa8J3QNX5 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Shisa8J3QNX5 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Shisa8J3QNX5 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Shisa8J3QNX5 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Shisa8J3QNX5 Matn2-206ENSMUST00000228570 2798 ntBASIC13.55□□□□□ -0.24
Shisa8J3QNX5 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Shisa8J3QNX5 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Shisa8J3QNX5 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Shisa8J3QNX5 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Shisa8J3QNX5 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Shisa8J3QNX5 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
Shisa8J3QNX5 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Shisa8J3QNX5 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Shisa8J3QNX5 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Shisa8J3QNX5 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Shisa8J3QNX5 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Shisa8J3QNX5 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Shisa8J3QNX5 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Shisa8J3QNX5 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Shisa8J3QNX5 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Shisa8J3QNX5 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Shisa8J3QNX5 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Shisa8J3QNX5 Gm15165-201ENSMUST00000118140 502 ntBASIC13.55□□□□□ -0.24
Shisa8J3QNX5 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC13.55□□□□□ -0.24
Shisa8J3QNX5 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Shisa8J3QNX5 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC13.55□□□□□ -0.24
Shisa8J3QNX5 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Shisa8J3QNX5 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Shisa8J3QNX5 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.55□□□□□ -0.24
Shisa8J3QNX5 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Shisa8J3QNX5 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Shisa8J3QNX5 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Shisa8J3QNX5 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Shisa8J3QNX5 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Shisa8J3QNX5 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Shisa8J3QNX5 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Shisa8J3QNX5 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Shisa8J3QNX5 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms