Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13d-3J3QMG8 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13d-3J3QMG8 Gm9727-201ENSMUST00000161387 555 ntBASIC13.05□□□□□ -0.32
Trav13d-3J3QMG8 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC13.05□□□□□ -0.32
Trav13d-3J3QMG8 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13d-3J3QMG8 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC13.05□□□□□ -0.32
Trav13d-3J3QMG8 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13d-3J3QMG8 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13d-3J3QMG8 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13d-3J3QMG8 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trav13d-3J3QMG8 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13d-3J3QMG8 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13d-3J3QMG8 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13d-3J3QMG8 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13d-3J3QMG8 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13d-3J3QMG8 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13d-3J3QMG8 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13d-3J3QMG8 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13d-3J3QMG8 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13d-3J3QMG8 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Trav13d-3J3QMG8 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13d-3J3QMG8 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav13d-3J3QMG8 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13d-3J3QMG8 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13d-3J3QMG8 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Trav13d-3J3QMG8 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13d-3J3QMG8 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13d-3J3QMG8 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13d-3J3QMG8 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13d-3J3QMG8 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trav13d-3J3QMG8 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13d-3J3QMG8 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13d-3J3QMG8 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
Trav13d-3J3QMG8 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13d-3J3QMG8 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13d-3J3QMG8 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13d-3J3QMG8 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trav13d-3J3QMG8 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trav13d-3J3QMG8 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav13d-3J3QMG8 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.04□□□□□ -0.32
Trav13d-3J3QMG8 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13d-3J3QMG8 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13d-3J3QMG8 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trav13d-3J3QMG8 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trav13d-3J3QMG8 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.04□□□□□ -0.32
Trav13d-3J3QMG8 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC13.04□□□□□ -0.32
Trav13d-3J3QMG8 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav13d-3J3QMG8 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trav13d-3J3QMG8 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trav13d-3J3QMG8 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav13d-3J3QMG8 Gm17968-201ENSMUST00000194902 784 ntBASIC13.04□□□□□ -0.32
Trav13d-3J3QMG8 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC13.04□□□□□ -0.32
Trav13d-3J3QMG8 Thap2-203ENSMUST00000218989 527 ntBASIC13.04□□□□□ -0.32
Trav13d-3J3QMG8 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC13.04□□□□□ -0.32
Trav13d-3J3QMG8 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13d-3J3QMG8 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.04□□□□□ -0.32
Trav13d-3J3QMG8 Gm10154-201ENSMUST00000084445 354 ntBASIC13.04□□□□□ -0.32
Trav13d-3J3QMG8 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trav13d-3J3QMG8 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13d-3J3QMG8 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13d-3J3QMG8 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13d-3J3QMG8 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13d-3J3QMG8 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13d-3J3QMG8 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13d-3J3QMG8 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13d-3J3QMG8 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13d-3J3QMG8 AC131586.3-201ENSMUST00000228355 1367 ntBASIC13.04□□□□□ -0.32
Trav13d-3J3QMG8 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav13d-3J3QMG8 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13d-3J3QMG8 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13d-3J3QMG8 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13d-3J3QMG8 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13d-3J3QMG8 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13d-3J3QMG8 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13d-3J3QMG8 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13d-3J3QMG8 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trav13d-3J3QMG8 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13d-3J3QMG8 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trav13d-3J3QMG8 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13d-3J3QMG8 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13d-3J3QMG8 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13d-3J3QMG8 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
Trav13d-3J3QMG8 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.03□□□□□ -0.32
Trav13d-3J3QMG8 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13d-3J3QMG8 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13d-3J3QMG8 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.03□□□□□ -0.32
Trav13d-3J3QMG8 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
Trav13d-3J3QMG8 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13.03□□□□□ -0.32
Trav13d-3J3QMG8 Gm44945-201ENSMUST00000206764 1187 ntBASIC13.03□□□□□ -0.32
Trav13d-3J3QMG8 Gm18206-201ENSMUST00000207027 926 ntBASIC13.03□□□□□ -0.32
Trav13d-3J3QMG8 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13d-3J3QMG8 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13d-3J3QMG8 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13d-3J3QMG8 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13d-3J3QMG8 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13d-3J3QMG8 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trav13d-3J3QMG8 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13d-3J3QMG8 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Trav13d-3J3QMG8 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13d-3J3QMG8 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms