Protein–RNA interactions for Protein: G3X9F6

Sh3tc1, SH3 domain and tetratricopeptide repeats 1, mousemouse

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc1G3X9F6 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sh3tc1G3X9F6 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC17.88■□□□□ 0.45
Sh3tc1G3X9F6 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sh3tc1G3X9F6 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sh3tc1G3X9F6 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sh3tc1G3X9F6 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sh3tc1G3X9F6 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC17.88■□□□□ 0.45
Sh3tc1G3X9F6 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Sh3tc1G3X9F6 Gm43195-201ENSMUST00000200614 2332 ntBASIC17.88■□□□□ 0.45
Sh3tc1G3X9F6 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sh3tc1G3X9F6 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sh3tc1G3X9F6 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sh3tc1G3X9F6 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sh3tc1G3X9F6 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sh3tc1G3X9F6 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sh3tc1G3X9F6 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Sh3tc1G3X9F6 Ldb3-207ENSMUST00000227819 1499 ntBASIC17.88■□□□□ 0.45
Sh3tc1G3X9F6 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sh3tc1G3X9F6 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sh3tc1G3X9F6 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Sh3tc1G3X9F6 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC17.87■□□□□ 0.45
Sh3tc1G3X9F6 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Sh3tc1G3X9F6 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sh3tc1G3X9F6 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Sh3tc1G3X9F6 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sh3tc1G3X9F6 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Sh3tc1G3X9F6 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC17.87■□□□□ 0.45
Sh3tc1G3X9F6 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Sh3tc1G3X9F6 Gm14042-201ENSMUST00000120139 833 ntBASIC17.87■□□□□ 0.45
Sh3tc1G3X9F6 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Sh3tc1G3X9F6 Gm23984-201ENSMUST00000157139 203 ntBASIC17.87■□□□□ 0.45
Sh3tc1G3X9F6 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC17.87■□□□□ 0.45
Sh3tc1G3X9F6 Gm37230-201ENSMUST00000194491 818 ntBASIC17.87■□□□□ 0.45
Sh3tc1G3X9F6 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC17.87■□□□□ 0.45
Sh3tc1G3X9F6 AC130829.1-201ENSMUST00000221548 494 ntBASIC17.87■□□□□ 0.45
Sh3tc1G3X9F6 AC156016.3-201ENSMUST00000228623 344 ntBASIC17.87■□□□□ 0.45
Sh3tc1G3X9F6 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sh3tc1G3X9F6 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sh3tc1G3X9F6 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sh3tc1G3X9F6 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sh3tc1G3X9F6 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sh3tc1G3X9F6 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sh3tc1G3X9F6 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sh3tc1G3X9F6 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sh3tc1G3X9F6 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sh3tc1G3X9F6 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Sh3tc1G3X9F6 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sh3tc1G3X9F6 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Sh3tc1G3X9F6 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sh3tc1G3X9F6 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sh3tc1G3X9F6 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Sh3tc1G3X9F6 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sh3tc1G3X9F6 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sh3tc1G3X9F6 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sh3tc1G3X9F6 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Sh3tc1G3X9F6 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sh3tc1G3X9F6 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Sh3tc1G3X9F6 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Sh3tc1G3X9F6 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Sh3tc1G3X9F6 Gm9522-201ENSMUST00000182394 926 ntBASIC17.86■□□□□ 0.45
Sh3tc1G3X9F6 Olfr286-202ENSMUST00000205305 969 ntBASIC17.86■□□□□ 0.45
Sh3tc1G3X9F6 AC132467.2-202ENSMUST00000227726 559 ntBASIC17.86■□□□□ 0.45
Sh3tc1G3X9F6 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sh3tc1G3X9F6 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sh3tc1G3X9F6 Gm6180-201ENSMUST00000065243 498 ntBASIC17.86■□□□□ 0.45
Sh3tc1G3X9F6 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Sh3tc1G3X9F6 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Sh3tc1G3X9F6 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sh3tc1G3X9F6 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sh3tc1G3X9F6 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Sh3tc1G3X9F6 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Sh3tc1G3X9F6 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Sh3tc1G3X9F6 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sh3tc1G3X9F6 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sh3tc1G3X9F6 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sh3tc1G3X9F6 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sh3tc1G3X9F6 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sh3tc1G3X9F6 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sh3tc1G3X9F6 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Sh3tc1G3X9F6 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC17.85■□□□□ 0.45
Sh3tc1G3X9F6 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Sh3tc1G3X9F6 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Sh3tc1G3X9F6 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Sh3tc1G3X9F6 Gm42612-201ENSMUST00000197986 623 ntBASIC17.85■□□□□ 0.45
Sh3tc1G3X9F6 Gm43170-201ENSMUST00000199827 612 ntBASIC17.85■□□□□ 0.45
Sh3tc1G3X9F6 Gm7390-201ENSMUST00000212452 1216 ntBASIC17.85■□□□□ 0.45
Sh3tc1G3X9F6 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC17.85■□□□□ 0.45
Sh3tc1G3X9F6 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Sh3tc1G3X9F6 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Sh3tc1G3X9F6 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sh3tc1G3X9F6 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sh3tc1G3X9F6 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sh3tc1G3X9F6 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sh3tc1G3X9F6 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sh3tc1G3X9F6 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sh3tc1G3X9F6 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sh3tc1G3X9F6 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sh3tc1G3X9F6 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC17.84■□□□□ 0.45
Sh3tc1G3X9F6 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sh3tc1G3X9F6 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms