Protein–RNA interactions for Protein: E9Q368

Tarbp1, TAR RNA-binding protein 1, mousemouse

Predictions only

Length 1,579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tarbp1E9Q368 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Tarbp1E9Q368 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
Tarbp1E9Q368 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tarbp1E9Q368 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tarbp1E9Q368 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Tarbp1E9Q368 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Tarbp1E9Q368 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tarbp1E9Q368 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tarbp1E9Q368 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Tarbp1E9Q368 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Tarbp1E9Q368 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Tarbp1E9Q368 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Tarbp1E9Q368 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Tarbp1E9Q368 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Tarbp1E9Q368 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Tarbp1E9Q368 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC20.6■□□□□ 0.89
Tarbp1E9Q368 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC20.6■□□□□ 0.89
Tarbp1E9Q368 AC238811.3-201ENSMUST00000225422 709 ntBASIC20.6■□□□□ 0.89
Tarbp1E9Q368 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tarbp1E9Q368 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tarbp1E9Q368 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tarbp1E9Q368 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tarbp1E9Q368 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Tarbp1E9Q368 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tarbp1E9Q368 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC20.59■□□□□ 0.89
Tarbp1E9Q368 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tarbp1E9Q368 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tarbp1E9Q368 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Tarbp1E9Q368 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tarbp1E9Q368 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tarbp1E9Q368 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Tarbp1E9Q368 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tarbp1E9Q368 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tarbp1E9Q368 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tarbp1E9Q368 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC20.59■□□□□ 0.89
Tarbp1E9Q368 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tarbp1E9Q368 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tarbp1E9Q368 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tarbp1E9Q368 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Tarbp1E9Q368 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tarbp1E9Q368 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Tarbp1E9Q368 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Tarbp1E9Q368 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Tarbp1E9Q368 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Tarbp1E9Q368 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Tarbp1E9Q368 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC20.58■□□□□ 0.89
Tarbp1E9Q368 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tarbp1E9Q368 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
Tarbp1E9Q368 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Tarbp1E9Q368 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tarbp1E9Q368 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Tarbp1E9Q368 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Tarbp1E9Q368 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC20.58■□□□□ 0.89
Tarbp1E9Q368 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tarbp1E9Q368 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tarbp1E9Q368 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tarbp1E9Q368 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tarbp1E9Q368 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tarbp1E9Q368 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tarbp1E9Q368 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tarbp1E9Q368 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Tarbp1E9Q368 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tarbp1E9Q368 Gm15460-201ENSMUST00000118147 391 ntBASIC20.58■□□□□ 0.88
Tarbp1E9Q368 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Tarbp1E9Q368 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC20.58■□□□□ 0.88
Tarbp1E9Q368 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC20.58■□□□□ 0.88
Tarbp1E9Q368 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC20.58■□□□□ 0.88
Tarbp1E9Q368 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC20.58■□□□□ 0.88
Tarbp1E9Q368 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC20.58■□□□□ 0.88
Tarbp1E9Q368 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC20.58■□□□□ 0.88
Tarbp1E9Q368 Gm19220-201ENSMUST00000222682 803 ntBASIC20.58■□□□□ 0.88
Tarbp1E9Q368 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tarbp1E9Q368 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC20.58■□□□□ 0.88
Tarbp1E9Q368 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Tarbp1E9Q368 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tarbp1E9Q368 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tarbp1E9Q368 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tarbp1E9Q368 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Tarbp1E9Q368 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Tarbp1E9Q368 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tarbp1E9Q368 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tarbp1E9Q368 Gm9252-201ENSMUST00000172364 1602 ntBASIC20.57■□□□□ 0.88
Tarbp1E9Q368 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tarbp1E9Q368 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Tarbp1E9Q368 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Tarbp1E9Q368 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tarbp1E9Q368 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC20.57■□□□□ 0.88
Tarbp1E9Q368 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tarbp1E9Q368 Gm37748-201ENSMUST00000194379 1140 ntBASIC20.57■□□□□ 0.88
Tarbp1E9Q368 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC20.57■□□□□ 0.88
Tarbp1E9Q368 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC20.57■□□□□ 0.88
Tarbp1E9Q368 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tarbp1E9Q368 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tarbp1E9Q368 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC20.57■□□□□ 0.88
Tarbp1E9Q368 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tarbp1E9Q368 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tarbp1E9Q368 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tarbp1E9Q368 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Tarbp1E9Q368 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC20.56■□□□□ 0.88
Tarbp1E9Q368 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms