Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Col4a6B1AVK5 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.04■□□□□ -0
Col4a6B1AVK5 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.04■□□□□ -0
Col4a6B1AVK5 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col4a6B1AVK5 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.04■□□□□ -0
Col4a6B1AVK5 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col4a6B1AVK5 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col4a6B1AVK5 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col4a6B1AVK5 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
Col4a6B1AVK5 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col4a6B1AVK5 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC15.04■□□□□ -0
Col4a6B1AVK5 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC15.04■□□□□ -0
Col4a6B1AVK5 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Col4a6B1AVK5 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Col4a6B1AVK5 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC15.04■□□□□ -0
Col4a6B1AVK5 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col4a6B1AVK5 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col4a6B1AVK5 Gm38037-201ENSMUST00000192600 1624 ntBASIC15.04■□□□□ -0
Col4a6B1AVK5 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Col4a6B1AVK5 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Col4a6B1AVK5 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col4a6B1AVK5 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC15.04■□□□□ -0
Col4a6B1AVK5 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Col4a6B1AVK5 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC15.04■□□□□ -0
Col4a6B1AVK5 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col4a6B1AVK5 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col4a6B1AVK5 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col4a6B1AVK5 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC15.03■□□□□ -0
Col4a6B1AVK5 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC15.03■□□□□ -0
Col4a6B1AVK5 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Col4a6B1AVK5 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col4a6B1AVK5 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Col4a6B1AVK5 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC15.03■□□□□ -0
Col4a6B1AVK5 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Col4a6B1AVK5 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col4a6B1AVK5 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col4a6B1AVK5 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Col4a6B1AVK5 Gm15240-201ENSMUST00000118156 720 ntBASIC15.03■□□□□ -0
Col4a6B1AVK5 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col4a6B1AVK5 Snora78-201ENSMUST00000158630 128 ntBASIC15.03■□□□□ -0
Col4a6B1AVK5 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC15.03■□□□□ -0
Col4a6B1AVK5 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.03■□□□□ -0
Col4a6B1AVK5 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col4a6B1AVK5 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC15.03■□□□□ -0
Col4a6B1AVK5 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC15.03■□□□□ -0
Col4a6B1AVK5 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Col4a6B1AVK5 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Col4a6B1AVK5 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col4a6B1AVK5 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Col4a6B1AVK5 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col4a6B1AVK5 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col4a6B1AVK5 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col4a6B1AVK5 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC15.02■□□□□ -0
Col4a6B1AVK5 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Col4a6B1AVK5 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
Col4a6B1AVK5 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col4a6B1AVK5 Gm9200-201ENSMUST00000118513 1354 ntBASIC15.02■□□□□ -0
Col4a6B1AVK5 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Col4a6B1AVK5 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC15.02□□□□□ -0.01
Col4a6B1AVK5 Gm12882-201ENSMUST00000121696 517 ntBASIC15.02□□□□□ -0.01
Col4a6B1AVK5 Gm6283-201ENSMUST00000182369 1000 ntBASIC15.02□□□□□ -0.01
Col4a6B1AVK5 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC15.02□□□□□ -0.01
Col4a6B1AVK5 Gm17795-201ENSMUST00000214505 757 ntBASIC15.02□□□□□ -0.01
Col4a6B1AVK5 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC15.02□□□□□ -0.01
Col4a6B1AVK5 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Col4a6B1AVK5 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Col4a6B1AVK5 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Col4a6B1AVK5 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Col4a6B1AVK5 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Col4a6B1AVK5 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Col4a6B1AVK5 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col4a6B1AVK5 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Col4a6B1AVK5 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col4a6B1AVK5 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Col4a6B1AVK5 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col4a6B1AVK5 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Col4a6B1AVK5 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
Col4a6B1AVK5 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col4a6B1AVK5 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Col4a6B1AVK5 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC15.01□□□□□ -0.01
Col4a6B1AVK5 Gm13226-201ENSMUST00000117838 404 ntBASIC15.01□□□□□ -0.01
Col4a6B1AVK5 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col4a6B1AVK5 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col4a6B1AVK5 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Col4a6B1AVK5 Gm27892-201ENSMUST00000185017 106 ntBASIC15.01□□□□□ -0.01
Col4a6B1AVK5 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC15.01□□□□□ -0.01
Col4a6B1AVK5 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC15.01□□□□□ -0.01
Col4a6B1AVK5 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC15.01□□□□□ -0.01
Col4a6B1AVK5 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col4a6B1AVK5 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Col4a6B1AVK5 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Col4a6B1AVK5 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col4a6B1AVK5 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col4a6B1AVK5 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col4a6B1AVK5 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col4a6B1AVK5 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Col4a6B1AVK5 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col4a6B1AVK5 BC037039-201ENSMUST00000192003 2205 ntBASIC15□□□□□ -0.01
Col4a6B1AVK5 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col4a6B1AVK5 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms