Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm11127A7VMS2 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm11127A7VMS2 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm11127A7VMS2 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm11127A7VMS2 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm11127A7VMS2 Gm4609-201ENSMUST00000106443 1002 ntBASIC13.19□□□□□ -0.3
Gm11127A7VMS2 Gm5138-201ENSMUST00000113842 1002 ntBASIC13.19□□□□□ -0.3
Gm11127A7VMS2 Gm15191-201ENSMUST00000117933 1000 ntBASIC13.19□□□□□ -0.3
Gm11127A7VMS2 Gm12182-201ENSMUST00000118655 1008 ntBASIC13.19□□□□□ -0.3
Gm11127A7VMS2 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Gm11127A7VMS2 Gm13882-201ENSMUST00000120886 1002 ntBASIC13.19□□□□□ -0.3
Gm11127A7VMS2 Gm10284-201ENSMUST00000145057 1005 ntBASIC13.19□□□□□ -0.3
Gm11127A7VMS2 Gm10481-201ENSMUST00000179228 1002 ntBASIC13.19□□□□□ -0.3
Gm11127A7VMS2 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC13.19□□□□□ -0.3
Gm11127A7VMS2 Gm2574-201ENSMUST00000181051 1002 ntBASIC13.19□□□□□ -0.3
Gm11127A7VMS2 Gm3200-201ENSMUST00000181493 1002 ntBASIC13.19□□□□□ -0.3
Gm11127A7VMS2 Gm8825-201ENSMUST00000182565 998 ntBASIC13.19□□□□□ -0.3
Gm11127A7VMS2 Gm4518-201ENSMUST00000182638 718 ntBASIC13.19□□□□□ -0.3
Gm11127A7VMS2 Gm8330-201ENSMUST00000182754 1008 ntBASIC13.19□□□□□ -0.3
Gm11127A7VMS2 Gm4575-201ENSMUST00000182991 1002 ntBASIC13.19□□□□□ -0.3
Gm11127A7VMS2 Gm8709-201ENSMUST00000183230 1012 ntBASIC13.19□□□□□ -0.3
Gm11127A7VMS2 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
Gm11127A7VMS2 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC13.19□□□□□ -0.3
Gm11127A7VMS2 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gm11127A7VMS2 AC127349.1-201ENSMUST00000224590 266 ntBASIC13.19□□□□□ -0.3
Gm11127A7VMS2 Otx2os1-206ENSMUST00000228153 787 ntBASIC13.19□□□□□ -0.3
Gm11127A7VMS2 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm11127A7VMS2 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm11127A7VMS2 Gm10293-201ENSMUST00000076317 1002 ntBASIC13.19□□□□□ -0.3
Gm11127A7VMS2 Gm6316-201ENSMUST00000082064 1020 ntBASIC13.19□□□□□ -0.3
Gm11127A7VMS2 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm11127A7VMS2 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm11127A7VMS2 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Gm11127A7VMS2 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gm11127A7VMS2 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gm11127A7VMS2 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm11127A7VMS2 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm11127A7VMS2 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm11127A7VMS2 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm11127A7VMS2 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gm11127A7VMS2 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.18□□□□□ -0.3
Gm11127A7VMS2 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm11127A7VMS2 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm11127A7VMS2 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm11127A7VMS2 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm11127A7VMS2 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Gm11127A7VMS2 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Gm11127A7VMS2 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm11127A7VMS2 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm11127A7VMS2 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm11127A7VMS2 Gm7669-201ENSMUST00000210184 1603 ntBASIC13.18□□□□□ -0.3
Gm11127A7VMS2 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm11127A7VMS2 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gm11127A7VMS2 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.18□□□□□ -0.3
Gm11127A7VMS2 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm11127A7VMS2 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC13.18□□□□□ -0.3
Gm11127A7VMS2 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC13.18□□□□□ -0.3
Gm11127A7VMS2 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC13.18□□□□□ -0.3
Gm11127A7VMS2 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gm11127A7VMS2 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC13.18□□□□□ -0.3
Gm11127A7VMS2 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm11127A7VMS2 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC13.18□□□□□ -0.3
Gm11127A7VMS2 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.18□□□□□ -0.3
Gm11127A7VMS2 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC13.18□□□□□ -0.3
Gm11127A7VMS2 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gm11127A7VMS2 AC154471.1-201ENSMUST00000224418 436 ntBASIC13.18□□□□□ -0.3
Gm11127A7VMS2 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm11127A7VMS2 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm11127A7VMS2 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC13.18□□□□□ -0.3
Gm11127A7VMS2 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm11127A7VMS2 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Gm11127A7VMS2 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.18□□□□□ -0.3
Gm11127A7VMS2 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Gm11127A7VMS2 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gm11127A7VMS2 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm11127A7VMS2 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm11127A7VMS2 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm11127A7VMS2 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm11127A7VMS2 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm11127A7VMS2 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm11127A7VMS2 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm11127A7VMS2 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm11127A7VMS2 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm11127A7VMS2 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm11127A7VMS2 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gm11127A7VMS2 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Gm11127A7VMS2 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gm11127A7VMS2 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.17□□□□□ -0.3
Gm11127A7VMS2 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm11127A7VMS2 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm11127A7VMS2 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC13.17□□□□□ -0.3
Gm11127A7VMS2 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC13.17□□□□□ -0.3
Gm11127A7VMS2 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gm11127A7VMS2 Gm27867-201ENSMUST00000184778 125 ntBASIC13.17□□□□□ -0.3
Gm11127A7VMS2 Gm33142-201ENSMUST00000193913 867 ntBASIC13.17□□□□□ -0.3
Gm11127A7VMS2 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm11127A7VMS2 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC13.17□□□□□ -0.3
Gm11127A7VMS2 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gm11127A7VMS2 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm11127A7VMS2 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms